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getting_started.txt
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111 lines (108 loc) · 4.8 KB
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<div class="subheading">
Portals
</div>
<div class="boxsubcontent">
<a class="creativitylinks" href="/breeders/">Breeder's Toolbox</a><br />
<a href="/outreach/">Outreach</a><br />
</div>
<div class="subheading">
SGN info
</div>
<div class="boxsubcontent">
<a class="creativitylinks" href="/content/sgn_data.pl">SGN data overview</a><br />
<a class="creativitylinks" href="/about/index.pl">More about SGN</a><br />
<a class="creativitylinks" href="/solanaceae-project/index.pl">SOL project</a> <br />
<a class="creativitylinks" href="/solanaceae-project/index.pl#SOL_news">SOL newsletter</a><br />
<a class="creativitylinks" href="/about/tomato_sequencing.pl">International tomato project</a><br />
<a class="creativitylinks" href="/about/ecosol/">The ECO-SOL project</a><br />
<a class="creativitylinks" href="/secretom/">The Secretom project</a><br />
</div>
<div class="subheading">
SOL species
</div>
<div class="boxsubcontent">
<i>Solanaceae</i><br />
<a class="creativitylinks" href="/content/sgn_data.pl#Solanumlycopersicum">Tomato</a> |
<a class="creativitylinks" href="/content/sgn_data.pl#Solanumtuberosum">Potato</a> |
<a class="creativitylinks" href="/content/sgn_data.pl#Capsicumannuum">Pepper</a><br />
<a class="creativitylinks" href="/content/sgn_data.pl#Solanummelongena">Eggplant</a> |
<a class="creativitylinks" href="/content/sgn_data.pl#Petuniahybrida">Petunia</a> |
<a class="creativitylinks" href="/content/sgn_data.pl#Nicotianatabacum">Nicotiana</a><br />
<a class="creativitylinks" href=
"/about/solanum_nomenclature.pl">Solanum nomenclature</a>
<br />
<table cellpadding="0" cellspacing="0">
<tr><td>
<i>Rubiaceae</i><br />
<a class="creativitylinks" href="/content/coffee.pl">Coffee</a><br />
</td>
<td width="10"> </td>
<td>
<i>Plantaginaceae</i><br />
<a class="creativitylinks" href="/content/sgn_data.pl#Antirrhinummajus">Snapdragon</a><br />
</td></tr></table>
</div>
<div class="subheading">
Tomato genome
</div>
<div class="boxsubcontent">
<a class="creativitylinks" href="/about/tomato_sequencing.pl">Sequencing progress</a><br />
<a class="creativitylinks" href="/search/direct_search.pl?search=BACs">Search BACs</a><br />
<a class="creativitylinks" href="/maps/physical/overgo_process_explained.pl">Overgo plating process</a><br />
<a class="creativitylinks" href="/gbrowse/">Genome browser</a><br />
<a class="creativitylinks" href="/solanaceae-project/sol-bioinformatics/">SOL bioinformatics resources</a><br />
</div>
<div class="subheading">
Maps and markers
</div>
<div class="boxsubcontent">
<a class="creativitylinks" href="/cview/index.pl">Available maps</a><br />
<a class="creativitylinks" href="/search/direct_search.pl?search=Markers">Search markers</a><br />
More about <a class="creativitylinks" href="markers/microsats.pl">SSR</a> |
<a class="creativitylinks" href="markers/cos_markers.pl">COS</a> |
<a class="creativitylinks" href="markers/cosii_markers.pl">COSII</a><br />
<a class="creativitylinks" href="ftp://ftp.solgenomics.net/COSII/">COSII marker data (FTP)</a><br />
</div>
<div class="subheading">
SOL Loci
</div>
<div class="boxsubcontent">
<a class="creativitylinks" href="/search/direct_search.pl?search=loci">Search Solanaceae loci</a><br />
<a class="creativitylinks" href="/phenome/">Submit locus annotations</a>
</div>
<div class="subheading">
Phenotypes and mutants
</div>
<div class="boxsubcontent">
<a class="creativitylinks" href="/search/direct_search.pl?search=phenotypes">Solanaceae phenotypes search</a><br />
<a class="creativitylinks" href="/phenome/">Submit phenotype information</a><br />
<!-- a class="creativitylinks" href=
"/mutants/mutants_main.pl">Other mutant pages</a -->
</div>
<div class="subheading">
Sequences
</div>
<div class="boxsubcontent">
<a class="creativitylinks" href="/search/direct_search.pl?search=bacs">Search BACs and BAC ends</a><br />
<a class="creativitylinks" href="/search/direct_search.pl?search=EST">Search ESTs</a> |
<a class="creativitylinks" href="/search/direct_search.pl?search=Unigene">Unigenes</a> |
<a class="creativitylinks" href="/search/direct_search.pl?search=Loci">Loci</a>
<!-- a class="creativitylinks" href="/search/library_search.pl?term=">cDNA libraries</a><br /> -->
</div>
<div class="subheading">
Tools
</div>
<div class="boxsubcontent">
<a class="creativitylinks" href="/tools/blast/">BLAST</a> |
<a class="creativitylinks" href="/tools/intron_detection/find_introns.pl">Intronfinder</a><br />
<a class="creativitylinks" href="/tools/align_viewer/">Alignment</a> &
<a class="creativitylinks" href="/tools/tree_browser/">tree browser</a><br />
<a class="creativitylinks" href="/downloads/">Downloads</a> | <a class="creativitylink" href="ftp://ftp.solgenomics.net/">FTP Site</a>
</div>
<div class="subheading">
Order cDNA & BAC clones
</div>
<div class="boxsubcontent">
<a class="creativitylinks" href=
"/help/ordering/index.pl">Ordering page</a>
</div>