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Merge pull request #258 from NHSDigital/patch-AWS-Package-fixes
Fixes to StructureDefinitions
2 parents 1ec428c + e766c83 commit eacbd6d

19 files changed

Lines changed: 78 additions & 344 deletions

‎CodeSystem/CodeSystem-Genomics-mds-questiontag.json‎

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@@ -43,7 +43,7 @@
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{
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"code": "HCP-13",
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"display": "HCP - surname",
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"definition": "HCP'surname "
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"definition": "HCP's surname."
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},
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{
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"code": "HCP-3",

‎CodeSystem/CodeSystem-Genomics-test-associationReason.json‎

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@@ -31,7 +31,7 @@
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},
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{
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"code": "reinterpretation",
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"display": " Re-interpretation"
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"display": "Re-interpretation"
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},
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{
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"code": "retest",

‎Observation/Observation-SLC52A2-VariantAbsent-Example.json‎

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@@ -53,15 +53,13 @@
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],
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"text": "Variant not detected"
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},
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"method": [
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{
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"coding": [
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{
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"system": "http://snomed.info/sct",
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"code": "117040002",
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"display": "Nucleic acid sequencing"
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}
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]
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}
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]
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"method": {
57+
"coding": [
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{
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"system": "http://snomed.info/sct",
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"code": "117040002",
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"display": "Nucleic acid sequencing"
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}
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]
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}
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}

‎SearchParameter/SearchParameter-Genomics-plandefinition-actor-role.json‎

Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -3,7 +3,7 @@
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"id": "SearchParameter-plandefinition-actor-role",
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"url": "https://fhir.nhs.uk/SearchParameter/plandefinition-actor-role",
55
"version": "0.1.0",
6-
"name": "PlanDefinition Actor Role",
6+
"name": "PlanDefinition_Actor_Role",
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"status": "draft",
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"experimental": false,
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"date": "2026-05-19",

‎StructureDefinition/NHSEngland-Condition-GenomicsmCODE.json‎

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Original file line numberDiff line numberDiff line change
@@ -2,11 +2,11 @@
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"resourceType": "StructureDefinition",
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"id": "NHSEngland-Condition-GenomicsmCODE",
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"url": "https://fhir.nhs.uk/StructureDefinition/NHSEngland-Condition-GenomicsmCODE",
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"version": "0.3.0",
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"version": "0.3.1",
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"name": "NHSEngland_Condition_GenomicsmCODE",
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"title": "NHSEngland Condition GenomicsmCODE",
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"status": "active",
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"date": "2026-04-16",
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"date": "2026-08-25",
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"publisher": "NHS England",
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"contact": [
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{
@@ -79,7 +79,7 @@
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"path": "Condition.category",
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"sliceName": "ukcoreCategory",
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"binding": {
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"strength": "extensible",
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"strength": "required",
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"valueSet": "https://fhir.hl7.org.uk/ValueSet/UKCore-ConditionCategory"
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}
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},
@@ -94,8 +94,8 @@
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"slicing": {
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"discriminator": [
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{
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"type": "pattern",
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"path": "$this"
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"type": "value",
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"path": "system"
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}
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],
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"rules": "open"
@@ -146,46 +146,6 @@
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"path": "Condition.subject",
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"definition": "SHALL be present. Reference to the associated Patient. This MAY be through a resource reference if the ID on the central service is known (or provided within the transaction bundle) or through NHS number where this is known and has been traced through PDS"
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},
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{
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"id": "Condition.recorder",
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"path": "Condition.recorder",
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"type": [
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{
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"code": "Reference",
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"targetProfile": [
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"https://fhir.nhs.uk/StructureDefinition/NHSEngland-PractitionerRole-Genomics",
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"http://hl7.org/fhir/StructureDefinition/Practitioner",
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"http://hl7.org/fhir/StructureDefinition/PractitionerRole",
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"http://hl7.org/fhir/StructureDefinition/Patient",
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"http://hl7.org/fhir/StructureDefinition/RelatedPerson"
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],
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"aggregation": [
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"referenced",
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"bundled"
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]
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}
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]
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},
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{
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"id": "Condition.asserter",
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"path": "Condition.asserter",
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"type": [
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{
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"code": "Reference",
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"targetProfile": [
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"https://fhir.nhs.uk/StructureDefinition/NHSEngland-PractitionerRole-Genomics",
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"http://hl7.org/fhir/StructureDefinition/Practitioner",
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"http://hl7.org/fhir/StructureDefinition/PractitionerRole",
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"http://hl7.org/fhir/StructureDefinition/Patient",
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"http://hl7.org/fhir/StructureDefinition/RelatedPerson"
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],
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"aggregation": [
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"referenced",
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"bundled"
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]
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}
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]
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},
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{
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"id": "Condition.note",
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"path": "Condition.note",

‎StructureDefinition/NHSEngland-Consent-GenomicsPCF.json‎

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Original file line numberDiff line numberDiff line change
@@ -2,11 +2,11 @@
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"resourceType": "StructureDefinition",
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"id": "NHSEngland-Consent-GenomicsPCF",
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"url": "https://fhir.nhs.uk/StructureDefinition/NHSEngland-Consent-GenomicsPCF",
5-
"version": "0.3.0",
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"version": "0.3.1",
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"name": "NHSEngland_Consent_GenomicsPCF",
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"title": "NHSEngland Consent GenomicsPCF",
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"status": "active",
9-
"date": "2026-04-16",
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"date": "2026-08-25",
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"publisher": "NHS England",
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"contact": [
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{
@@ -139,10 +139,6 @@
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"type": [
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{
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"code": "Reference",
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"targetProfile": [
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"https://fhir.nhs.uk/StructureDefinition/NHSEngland-Patient-Genomics",
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"http://hl7.org/fhir/StructureDefinition/Patient"
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],
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"aggregation": [
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"referenced",
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"bundled"
@@ -162,14 +158,6 @@
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"type": [
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{
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"code": "Reference",
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"targetProfile": [
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"https://fhir.nhs.uk/StructureDefinition/NHSEngland-PractitionerRole-Genomics",
167-
"http://hl7.org/fhir/StructureDefinition/Organization",
168-
"http://hl7.org/fhir/StructureDefinition/Patient",
169-
"http://hl7.org/fhir/StructureDefinition/Practitioner",
170-
"http://hl7.org/fhir/StructureDefinition/RelatedPerson",
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"http://hl7.org/fhir/StructureDefinition/PractitionerRole"
172-
],
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"aggregation": [
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"referenced",
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"bundled"
@@ -263,10 +251,6 @@
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"type": [
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{
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"code": "Reference",
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"targetProfile": [
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"https://fhir.nhs.uk/StructureDefinition/NHSEngland-ServiceRequest-Genomics",
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"http://hl7.org/fhir/StructureDefinition/Resource"
269-
],
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"aggregation": [
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"referenced",
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"bundled"

‎StructureDefinition/NHSEngland-DiagnosticReport-GenomicReport.json‎

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Original file line numberDiff line numberDiff line change
@@ -2,11 +2,11 @@
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"resourceType": "StructureDefinition",
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"id": "NHSEngland-DiagnosticReport-GenomicReport",
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"url": "https://fhir.nhs.uk/StructureDefinition/NHSEngland-DiagnosticReport-GenomicReport",
5-
"version": "0.3.0",
5+
"version": "0.3.1",
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"name": "NHSEngland_DiagnosticReport_GenomicReport",
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"title": "NHSEngland DiagnosticReport GenomicReport",
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"status": "active",
9-
"date": "2026-04-16",
9+
"date": "2026-08-25",
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"publisher": "NHS England",
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"contact": [
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{
@@ -242,13 +242,6 @@
242242
"type": [
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{
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"code": "Reference",
245-
"targetProfile": [
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"https://fhir.nhs.uk/StructureDefinition/NHSEngland-Patient-Genomics",
247-
"http://hl7.org/fhir/StructureDefinition/Patient",
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"http://hl7.org/fhir/StructureDefinition/Group",
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"http://hl7.org/fhir/StructureDefinition/Device",
250-
"http://hl7.org/fhir/StructureDefinition/Location"
251-
],
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"aggregation": [
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"referenced"
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]
@@ -263,23 +256,7 @@
263256
{
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"id": "DiagnosticReport.performer",
265258
"path": "DiagnosticReport.performer",
266-
"definition": "SHOULD reference the organization responsible for the testing, preferably by ODS code.",
267-
"type": [
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{
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"code": "Reference",
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"targetProfile": [
271-
"https://fhir.hl7.org.uk/StructureDefinition/UKCore-Organization",
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"http://hl7.org/fhir/StructureDefinition/Practitioner",
273-
"http://hl7.org/fhir/StructureDefinition/PractitionerRole",
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"http://hl7.org/fhir/StructureDefinition/Organization",
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"http://hl7.org/fhir/StructureDefinition/CareTeam"
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],
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"aggregation": [
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"referenced",
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"bundled"
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]
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}
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]
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"definition": "SHOULD reference the organization responsible for the testing, preferably by ODS code."
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},
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{
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"id": "DiagnosticReport.performer.reference",
@@ -294,28 +271,12 @@
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{
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"id": "DiagnosticReport.performer.identifier.system",
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"path": "DiagnosticReport.performer.identifier.system",
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"fixedUri": "https://fhir.nhs.uk/Id/ods-organisation-code"
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"fixedUri": "https://fhir.nhs.uk/Id/ods-organization-code"
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},
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{
300277
"id": "DiagnosticReport.resultsInterpreter",
301278
"path": "DiagnosticReport.resultsInterpreter",
302-
"definition": "SHOULD reference the person responsible for interpreting the raw results, preferably by a recognised NHS identifier, such as SDS code.",
303-
"type": [
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{
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"code": "Reference",
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"targetProfile": [
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"https://fhir.nhs.uk/StructureDefinition/NHSEngland-PractitionerRole-Genomics",
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"http://hl7.org/fhir/StructureDefinition/Practitioner",
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"http://hl7.org/fhir/StructureDefinition/PractitionerRole",
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"http://hl7.org/fhir/StructureDefinition/Organization",
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"http://hl7.org/fhir/StructureDefinition/CareTeam"
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],
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"aggregation": [
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"referenced",
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"bundled"
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]
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}
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]
279+
"definition": "SHOULD reference the person responsible for interpreting the raw results, preferably by a recognised NHS identifier, such as SDS code."
319280
},
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{
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"id": "DiagnosticReport.specimen",
@@ -325,10 +286,6 @@
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"type": [
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{
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"code": "Reference",
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"targetProfile": [
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"https://fhir.nhs.uk/StructureDefinition/NHSEngland-Specimen-Genomics",
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"http://hl7.org/fhir/StructureDefinition/Specimen"
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],
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"aggregation": [
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"referenced"
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]

‎StructureDefinition/NHSEngland-DocumentReference-GenomicDataFile.json‎

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"resourceType": "StructureDefinition",
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"id": "NHSEngland-DocumentReference-GenomicDataFile",
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"url": "https://fhir.nhs.uk/StructureDefinition/NHSEngland-DocumentReference-GenomicDataFile",
5-
"version": "0.3.0",
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"version": "0.3.1",
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"name": "NHSEngland_DocumentReference_GenomicDataFile",
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"title": "NHSEngland DocumentReference GenomicDataFile",
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"status": "active",
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"date": "2026-04-16",
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"date": "2026-08-25",
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"publisher": "NHS England",
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"contact": [
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{
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"type": [
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{
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"code": "Reference",
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"targetProfile": [
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"https://fhir.nhs.uk/StructureDefinition/NHSEngland-Patient-Genomics",
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"http://hl7.org/fhir/StructureDefinition/Patient",
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"http://hl7.org/fhir/StructureDefinition/Practitioner",
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"http://hl7.org/fhir/StructureDefinition/Group",
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"http://hl7.org/fhir/StructureDefinition/Device"
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],
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"aggregation": [
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"referenced"
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]
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{
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"code": "Reference",
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"targetProfile": [
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"https://fhir.nhs.uk/StructureDefinition/NHSEngland-Specimen-Genomics",
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"https://fhir.nhs.uk/StructureDefinition/NHSEngland-DiagnosticReport-GenomicReport",
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"https://fhir.nhs.uk/StructureDefinition/NHSEngland-ServiceRequest-Genomics",
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"http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomic-report"
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],
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"aggregation": [

‎StructureDefinition/NHSEngland-FamilyMemberHistory-Genomics.json‎

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"resourceType": "StructureDefinition",
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"id": "NHSEngland-FamilyMemberHistory-Genomics",
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"url": "https://fhir.nhs.uk/StructureDefinition/NHSEngland-FamilyMemberHistory-Genomics",
5-
"version": "0.3.0",
5+
"version": "0.3.1",
66
"name": "NHSEngland_FamilyMemberHistory_Genomics",
77
"title": "NHSEngland FamilyMemberHistory Genomics",
88
"status": "active",
9-
"date": "2026-04-16",
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"date": "2026-08-25",
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"publisher": "NHS England",
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"contact": [
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{
@@ -64,10 +64,6 @@
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"type": [
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{
6666
"code": "Reference",
67-
"targetProfile": [
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"https://fhir.nhs.uk/StructureDefinition/NHSEngland-Patient-Genomics",
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"http://hl7.org/fhir/StructureDefinition/Patient"
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],
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"aggregation": [
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"referenced",
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"bundled"

‎StructureDefinition/NHSEngland-Group-Genomics.json‎

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"resourceType": "StructureDefinition",
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"id": "NHSEngland-Group-Genomics",
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"url": "https://fhir.nhs.uk/StructureDefinition/NHSEngland-Group-Genomics",
5-
"version": "0.3.0",
5+
"version": "0.3.1",
66
"name": "NHSEngland_Group_Genomics",
77
"title": "NHSEngland Group Genomics",
88
"status": "active",
9-
"date": "2026-04-16",
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"date": "2026-08-25",
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"publisher": "NHS England",
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"contact": [
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{
@@ -75,29 +75,6 @@
7575
"path": "Group.member",
7676
"definition": "SHALL be present. `entity` SHOULD be a reference to a Patient resource within the GOMS infrastructure or a unique identifier where this is not possible. `period` SHOULD record the date the member was added to the Group. `inactive` MAY be used to record entities which are no longer members of the group, though if an individual was added to a Group in error and should never have been part of the group, the entity SHALL be removed entirely.",
7777
"min": 1
78-
},
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{
80-
"id": "Group.member.entity",
81-
"path": "Group.member.entity",
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"type": [
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{
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"code": "Reference",
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"targetProfile": [
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"https://fhir.nhs.uk/StructureDefinition/NHSEngland-Patient-Genomics",
87-
"http://hl7.org/fhir/StructureDefinition/Patient",
88-
"http://hl7.org/fhir/StructureDefinition/Practitioner",
89-
"http://hl7.org/fhir/StructureDefinition/PractitionerRole",
90-
"http://hl7.org/fhir/StructureDefinition/Device",
91-
"http://hl7.org/fhir/StructureDefinition/Medication",
92-
"http://hl7.org/fhir/StructureDefinition/Substance",
93-
"http://hl7.org/fhir/StructureDefinition/Group"
94-
],
95-
"aggregation": [
96-
"referenced",
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"bundled"
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]
99-
}
100-
]
10178
}
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]
10380
}

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