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Motion correction parameters.yaml changes for main_cnmfe_e.ipynb #19

Description

@lyprince

Motion correction parameter name changes needed in accompanying parameters.yaml file:

  • change batch_size to block_size
  • include max_shifts

e.g.

motion_correction:
strides: !!python/tuple [96,94]
overlaps: !!python/tuple [6,6]
upsample_factor_grid: 1
max_deviation_rigid: 10
max_deviation_patch: 1
max_shifts: [5, 5]
nb_round: 1
upsample_factor: 2
filter_size: 10
filter_size_patch: 5
block_size: 100
save_original: False

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