diff --git a/pyproject.toml b/pyproject.toml
index 3c0c80f1..d60db200 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -23,22 +23,22 @@ authors = [
 #     by packaging/rthook_ssl.py at launch.
 #   * packaging: used for version parsing in modules/constants/repo_info.py.
 dependencies = [
-    "PySide6==6.5.2",
-    "vtk==9.3.1",
+    "PySide6==6.11.2",
+    "vtk==9.7.0",
     "vedo==2023.4.7",
     "opencv-python-headless==4.8.1.78",
     "numpy==1.24.1",
-    "scipy==1.14.1",
-    "scikit-image==0.23.2",
-    "shapely==2.1.1",
+    "scipy==1.17.1",
+    "scikit-image==0.26.0",
+    "shapely==2.1.2",
     "trimesh==3.18.1",
     "zarr==2.18.2",
-    "numcodecs==0.15.0",
+    "numcodecs==0.16.5",
     "cloud-volume==11.0.0",
-    "lxml==6.1.0",
+    "lxml==6.1.2",
     "tifffile==2024.9.20",
     "qdarkstyle==3.2.3",
-    "gitpython==3.1.59",
+    "gitpython==3.1.61",
     "certifi",
     "packaging",
 ]
diff --git a/requirements.txt b/requirements.txt
index 43183c88..131788e6 100644
--- a/requirements.txt
+++ b/requirements.txt
@@ -1,16 +1,16 @@
-PySide6==6.5.2
+PySide6==6.11.2
 cloud-volume==11.0.0
-gitpython==3.1.59
-lxml==6.1.0
-numcodecs==0.15.0
+gitpython==3.1.61
+lxml==6.1.2
+numcodecs==0.16.5
 numpy==1.24.1
 opencv-python==4.8.1.78
 qdarkstyle==3.2.3
-scikit-image==0.23.2
-scipy==1.14.1
-shapely==2.1.1
+scikit-image==0.26.0
+scipy==1.17.1
+shapely==2.1.2
 tifffile==2024.9.20
 trimesh==3.18.1
 vedo==2023.4.7
-vtk==9.3.1
+vtk==9.7.0
 zarr==2.18.2