From c83ed2f62a96fc1065747d83fd9d2e424ec7d3e2 Mon Sep 17 00:00:00 2001
From: Dusten Hubbard <dusten@utexas.edu>
Date: Tue, 1 Sep 2026 14:12:16 -0500
Subject: [PATCH] fix(deps): restore the pre-#144 pins so main installs

#144 merged with its tests red. The bump raised scipy to 1.17.1 and left numpy
at 1.24.1, but scipy 1.17.1 needs numpy >=1.26.4, so the package cannot be
installed at all:

    ERROR: Cannot install pyreconstruct because these package versions have
    conflicting dependencies.
        pyreconstruct depends on numpy==1.24.1
        scipy 1.17.1 depends on numpy<2.7 and >=1.26.4

Every open dependency PR branches off main and fails the same way, whatever it
changes. This puts all eight pins back to the set CI last passed on. I will
bring the bumps back in pieces, starting with numpy.
---
 pyproject.toml   | 16 ++++++++--------
 requirements.txt | 16 ++++++++--------
 2 files changed, 16 insertions(+), 16 deletions(-)

diff --git a/pyproject.toml b/pyproject.toml
index d60db2006..3c0c80f14 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -23,22 +23,22 @@ authors = [
 #     by packaging/rthook_ssl.py at launch.
 #   * packaging: used for version parsing in modules/constants/repo_info.py.
 dependencies = [
-    "PySide6==6.11.2",
-    "vtk==9.7.0",
+    "PySide6==6.5.2",
+    "vtk==9.3.1",
     "vedo==2023.4.7",
     "opencv-python-headless==4.8.1.78",
     "numpy==1.24.1",
-    "scipy==1.17.1",
-    "scikit-image==0.26.0",
-    "shapely==2.1.2",
+    "scipy==1.14.1",
+    "scikit-image==0.23.2",
+    "shapely==2.1.1",
     "trimesh==3.18.1",
     "zarr==2.18.2",
-    "numcodecs==0.16.5",
+    "numcodecs==0.15.0",
     "cloud-volume==11.0.0",
-    "lxml==6.1.2",
+    "lxml==6.1.0",
     "tifffile==2024.9.20",
     "qdarkstyle==3.2.3",
-    "gitpython==3.1.61",
+    "gitpython==3.1.59",
     "certifi",
     "packaging",
 ]
diff --git a/requirements.txt b/requirements.txt
index 131788e6d..43183c889 100644
--- a/requirements.txt
+++ b/requirements.txt
@@ -1,16 +1,16 @@
-PySide6==6.11.2
+PySide6==6.5.2
 cloud-volume==11.0.0
-gitpython==3.1.61
-lxml==6.1.2
-numcodecs==0.16.5
+gitpython==3.1.59
+lxml==6.1.0
+numcodecs==0.15.0
 numpy==1.24.1
 opencv-python==4.8.1.78
 qdarkstyle==3.2.3
-scikit-image==0.26.0
-scipy==1.17.1
-shapely==2.1.2
+scikit-image==0.23.2
+scipy==1.14.1
+shapely==2.1.1
 tifffile==2024.9.20
 trimesh==3.18.1
 vedo==2023.4.7
-vtk==9.7.0
+vtk==9.3.1
 zarr==2.18.2