Description of the bug
Line 36 in the trimmomatic file casues failure if files do not end with .fastq e.g. .fq. This is only a testing line, and does not influence the rest of the module. It should just be removed in the next version.
echo "#TRACE fastq_lines=`cat *.fastq | wc -l`"
Command used and terminal output
No response
Relevant files
No response
System information
No response
Description of the bug
Line 36 in the trimmomatic file casues failure if files do not end with
.fastqe.g..fq. This is only a testing line, and does not influence the rest of the module. It should just be removed in the next version.Command used and terminal output
No response
Relevant files
No response
System information
No response