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Mux Code docs

Doc What it covers
specs/SPEC_MUXCODE_HARNESS_AND_FEATURE_GAPS_2026_09_26.md Why Mux Code doesn't work inside AgentMux today, the harness contract it must meet, and what it lacks against current CLI agents, in four phases
reports/REPORT_REPO_SETUP_PARITY_2026_09_26.md How this repo's reviews, CI, branch protection and notifications compare with agentmux and the a5af reference repos, and the admin steps still open

Specs are named SPEC_<TOPIC>_<YYYY_MM_DD>.md and start with a Status line: draft, proposed, active, implemented or historical. Work from a spec is tracked as GitHub issues in this repo, labelled by phase and priority.