Good day,
I'm experiencing issues while trying to create PNG from native KEGG pathways, both through R studio or through the terminal.
If working from Rstudio, I'm getting the following error:
Error in .External2(C_X11, paste0("png::", filename), g$width, g$height, :
unable to start device PNG
In addition: Warning message:
In png(img.file, width = width, height = height, res = res) :
unable to open connection to X11 display ''
If working from the terminal, the error is:
Warning message:
In png(img.file, width = width, height = height, res = res) :
type = "cairo" is unavailable. trying "Xlib"
... after which nothing happens, and the png file is not produced.
Has anyone experienced something similar? Any help greatly appreciated.
Best,
Nenad
Session info below:
R version 4.3.2 (2023-10-31)
Platform: x86_64-pc-linux-gnu (64-bit)
Running under: CentOS Linux 7 (Core)
pathview_1.42.0
Good day,
I'm experiencing issues while trying to create PNG from native KEGG pathways, both through R studio or through the terminal.
If working from Rstudio, I'm getting the following error:
Error in .External2(C_X11, paste0("png::", filename), g$width, g$height, :
unable to start device PNG
In addition: Warning message:
In png(img.file, width = width, height = height, res = res) :
unable to open connection to X11 display ''
If working from the terminal, the error is:
Warning message:
In png(img.file, width = width, height = height, res = res) :
type = "cairo" is unavailable. trying "Xlib"
... after which nothing happens, and the png file is not produced.
Has anyone experienced something similar? Any help greatly appreciated.
Best,
Nenad
Session info below:
R version 4.3.2 (2023-10-31)
Platform: x86_64-pc-linux-gnu (64-bit)
Running under: CentOS Linux 7 (Core)
pathview_1.42.0