From f1bed2f30aa374f3d11698889e4d552053a4f1d8 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?David=20Mu=C3=B1oz=20Tord?= Date: Thu, 20 Aug 2026 16:36:41 +0200 Subject: [PATCH 1/5] Update DESCRIPTION MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit Signed-off-by: David Muñoz Tord --- DESCRIPTION | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/DESCRIPTION b/DESCRIPTION index a71e6630..3ca9b980 100644 --- a/DESCRIPTION +++ b/DESCRIPTION @@ -24,7 +24,7 @@ URL: https://github.com/insightsengineering/scda.test/ BugReports: https://github.com/insightsengineering/scda.test/issues Depends: formatters (>= 0.5.12), - junco (>= 0.1.6), + junco (>= 0.1.6.9001), R (>= 4.2), rlistings (>= 0.2.13), rtables (>= 0.6.16), @@ -52,7 +52,7 @@ Suggests: VignetteBuilder: knitr Remotes: - johnsonandjohnson/junco@dev, + johnsonandjohnson/junco@new_unified_get_ref_info, johnsonandjohnson/pharmaversesdtmjnj@main, pharmaverse/formatters@main, pharmaverse/pharmaverseadam@main, From 1c05cd115516ceb9adb04caf187442c19ce0ba8c Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?David=20Mu=C3=B1oz=20Tord?= Date: Tue, 25 Aug 2026 14:17:40 +0200 Subject: [PATCH 2/5] Update DESCRIPTION MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit Signed-off-by: David Muñoz Tord --- DESCRIPTION | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/DESCRIPTION b/DESCRIPTION index 3ca9b980..19c7d7c4 100644 --- a/DESCRIPTION +++ b/DESCRIPTION @@ -52,7 +52,7 @@ Suggests: VignetteBuilder: knitr Remotes: - johnsonandjohnson/junco@new_unified_get_ref_info, + johnsonandjohnson/junco@450-update-jjcsformat_count_denom_fraction, johnsonandjohnson/pharmaversesdtmjnj@main, pharmaverse/formatters@main, pharmaverse/pharmaverseadam@main, From 4a1a148f238f8c56139124268ce32a3cbd7723b4 Mon Sep 17 00:00:00 2001 From: munoztd0 Date: Fri, 4 Sep 2026 15:18:00 +0000 Subject: [PATCH 3/5] update because junco#450 --- .../tsflab01apart2/tsflab01apart2of3.rtf | 2 +- tests/testthat/_snaps/tsflab05/tsflab05.rtf | 32 +++++++++---------- 2 files changed, 17 insertions(+), 17 deletions(-) mode change 100644 => 100755 tests/testthat/_snaps/tsflab01apart2/tsflab01apart2of3.rtf diff --git a/tests/testthat/_snaps/tsflab01apart2/tsflab01apart2of3.rtf b/tests/testthat/_snaps/tsflab01apart2/tsflab01apart2of3.rtf old mode 100644 new mode 100755 index 2483188a..8048cca8 --- a/tests/testthat/_snaps/tsflab01apart2/tsflab01apart2of3.rtf +++ b/tests/testthat/_snaps/tsflab01apart2/tsflab01apart2of3.rtf @@ -271,7 +271,7 @@ \clbrdrt\clbrdrl\clbrdrb\clbrdrr\clvertalb\cellx5178 \clbrdrt\clbrdrl\clbrdrb\clbrdrr\clvertalb\cellx8899 \clbrdrt\clbrdrl\clbrdrb\clbrdrr\clvertalb\cellx12701 \pard\intbl\ql\fs18 \intbl\li267\fi-87 Cycle 03 \cell -\pard\intbl\qc\fs18 0/5 (0.0%) \cell +\pard\intbl\qc\fs18 0/5 \cell \pard\intbl\qc\fs18 NE (NE, NE) \cell \pard\intbl\qc\fs18 NE (NE, NE) \cell \row diff --git a/tests/testthat/_snaps/tsflab05/tsflab05.rtf b/tests/testthat/_snaps/tsflab05/tsflab05.rtf index 9a8c0297..6d3b58a6 100755 --- a/tests/testthat/_snaps/tsflab05/tsflab05.rtf +++ b/tests/testthat/_snaps/tsflab05/tsflab05.rtf @@ -105,9 +105,9 @@ \clbrdrt\clbrdrl\clbrdrb\clbrdrr\clvertalb\cellx8203 \clbrdrt\clbrdrl\clbrdrb\clbrdrr\clvertalb\cellx10386 \clbrdrt\clbrdrl\clbrdrb\clbrdrr\clvertalb\cellx12701 \pard\intbl\ql\fs18 \intbl\li267\fi-87 Leukocytosis \cell -\pard\intbl\qc\fs18 0/53 (0.0%) \cell -\pard\intbl\qc\fs18 0/73 (0.0%) \cell -\pard\intbl\qc\fs18 0/59 (0.0%) \cell +\pard\intbl\qc\fs18 0/53 \cell +\pard\intbl\qc\fs18 0/73 \cell +\pard\intbl\qc\fs18 0/59 \cell \pard\intbl\qc\fs18 0.0 (0.0, 0.0) \cell \pard\intbl\qc\fs18 0.0 (0.0, 0.0) \cell \row @@ -153,8 +153,8 @@ \clbrdrt\clbrdrl\clbrdrb\clbrdrr\clvertalb\cellx8203 \clbrdrt\clbrdrl\clbrdrb\clbrdrr\clvertalb\cellx10386 \clbrdrt\clbrdrl\clbrdrb\clbrdrr\clvertalb\cellx12701 \pard\intbl\ql\fs18 \intbl\li267\fi-87 Alanine aminotransferase increased \cell -\pard\intbl\qc\fs18 0/53 (0.0%) \cell -\pard\intbl\qc\fs18 0/73 (0.0%) \cell +\pard\intbl\qc\fs18 0/53 \cell +\pard\intbl\qc\fs18 0/73 \cell \pard\intbl\qc\fs18 1/59 (1.7%) \cell \pard\intbl\qc\fs18 -1.7 (-5.0, 1.6) \cell \pard\intbl\qc\fs18 -1.7 (-5.0, 1.6) \cell @@ -169,8 +169,8 @@ \clbrdrt\clbrdrl\clbrdrb\clbrdrr\clvertalb\cellx8203 \clbrdrt\clbrdrl\clbrdrb\clbrdrr\clvertalb\cellx10386 \clbrdrt\clbrdrl\clbrdrb\clbrdrr\clvertalb\cellx12701 \pard\intbl\ql\fs18 \intbl\li267\fi-87 Alkaline phosphatase increased \cell -\pard\intbl\qc\fs18 0/53 (0.0%) \cell -\pard\intbl\qc\fs18 0/73 (0.0%) \cell +\pard\intbl\qc\fs18 0/53 \cell +\pard\intbl\qc\fs18 0/73 \cell \pard\intbl\qc\fs18 1/59 (1.7%) \cell \pard\intbl\qc\fs18 -1.7 (-5.0, 1.6) \cell \pard\intbl\qc\fs18 -1.7 (-5.0, 1.6) \cell @@ -203,7 +203,7 @@ \clbrdrt\clbrdrl\clbrdrb\clbrdrr\clvertalb\cellx12701 \pard\intbl\ql\fs18 \intbl\li267\fi-87 Blood bilirubin increased \cell \pard\intbl\qc\fs18 2/53 (3.8%) \cell \pard\intbl\qc\fs18 1/73 (1.4%) \cell -\pard\intbl\qc\fs18 0/59 (0.0%) \cell +\pard\intbl\qc\fs18 0/59 \cell \pard\intbl\qc\fs18 3.8 (-1.4, 8.9) \cell \pard\intbl\qc\fs18 1.4 (-1.3, 4.0) \cell \row @@ -233,9 +233,9 @@ \clbrdrt\clbrdrl\clbrdrb\clbrdrr\clvertalb\cellx8203 \clbrdrt\clbrdrl\clbrdrb\clbrdrr\clvertalb\cellx10386 \clbrdrt\clbrdrl\clbrdrb\clbrdrr\clvertalb\cellx12701 \pard\intbl\ql\fs18 \intbl\li267\fi-87 Creatinine increased \cell -\pard\intbl\qc\fs18 0/53 (0.0%) \cell -\pard\intbl\qc\fs18 0/73 (0.0%) \cell -\pard\intbl\qc\fs18 0/59 (0.0%) \cell +\pard\intbl\qc\fs18 0/53 \cell +\pard\intbl\qc\fs18 0/73 \cell +\pard\intbl\qc\fs18 0/59 \cell \pard\intbl\qc\fs18 0.0 (0.0, 0.0) \cell \pard\intbl\qc\fs18 0.0 (0.0, 0.0) \cell \row @@ -331,7 +331,7 @@ \clbrdrt\clbrdrl\clbrdrb\clbrdrr\clvertalb\cellx12701 \pard\intbl\ql\fs18 \intbl\li267\fi-87 Hyperglycemia \cell \pard\intbl\qc\fs18 4/53 (7.5%) \cell \pard\intbl\qc\fs18 1/73 (1.4%) \cell -\pard\intbl\qc\fs18 0/59 (0.0%) \cell +\pard\intbl\qc\fs18 0/59 \cell \pard\intbl\qc\fs18 7.5 (0.4, 14.7) \cell \pard\intbl\qc\fs18 1.4 (-1.3, 4.0) \cell \row @@ -345,8 +345,8 @@ \clbrdrt\clbrdrl\clbrdrb\clbrdrr\clvertalb\cellx8203 \clbrdrt\clbrdrl\clbrdrb\clbrdrr\clvertalb\cellx10386 \clbrdrt\clbrdrl\clbrdrb\clbrdrr\clvertalb\cellx12701 \pard\intbl\ql\fs18 \intbl\li267\fi-87 Hyperkalemia \cell -\pard\intbl\qc\fs18 0/53 (0.0%) \cell -\pard\intbl\qc\fs18 0/73 (0.0%) \cell +\pard\intbl\qc\fs18 0/53 \cell +\pard\intbl\qc\fs18 0/73 \cell \pard\intbl\qc\fs18 1/59 (1.7%) \cell \pard\intbl\qc\fs18 -1.7 (-5.0, 1.6) \cell \pard\intbl\qc\fs18 -1.7 (-5.0, 1.6) \cell @@ -362,8 +362,8 @@ \clbrdrt\clbrdrl\clbrdrb\clbrdrr\clvertalb\cellx10386 \clbrdrt\clbrdrl\clbrdrb\clbrdrr\clvertalb\cellx12701 \pard\intbl\ql\fs18 \intbl\li267\fi-87 Hypernatremia \cell \pard\intbl\qc\fs18 1/53 (1.9%) \cell -\pard\intbl\qc\fs18 0/73 (0.0%) \cell -\pard\intbl\qc\fs18 0/59 (0.0%) \cell +\pard\intbl\qc\fs18 0/73 \cell +\pard\intbl\qc\fs18 0/59 \cell \pard\intbl\qc\fs18 1.9 (-1.8, 5.5) \cell \pard\intbl\qc\fs18 0.0 (0.0, 0.0) \cell \row From 0beca9241937e123505a08da4d71f000441b61ca Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?David=20Mu=C3=B1oz=20Tord?= Date: Fri, 4 Sep 2026 16:46:02 +0100 Subject: [PATCH 4/5] Update DESCRIPTION MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit Signed-off-by: David Muñoz Tord --- DESCRIPTION | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/DESCRIPTION b/DESCRIPTION index 19c7d7c4..1d6383c8 100644 --- a/DESCRIPTION +++ b/DESCRIPTION @@ -52,7 +52,7 @@ Suggests: VignetteBuilder: knitr Remotes: - johnsonandjohnson/junco@450-update-jjcsformat_count_denom_fraction, + johnsonandjohnson/junco@dev, johnsonandjohnson/pharmaversesdtmjnj@main, pharmaverse/formatters@main, pharmaverse/pharmaverseadam@main, From d466c5e85213ea92332b3ddb43ed192cdb981b26 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?David=20Mu=C3=B1oz=20Tord?= Date: Mon, 7 Sep 2026 12:27:15 +0200 Subject: [PATCH 5/5] Update rtables reference to specific version MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit Signed-off-by: David Muñoz Tord --- DESCRIPTION | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/DESCRIPTION b/DESCRIPTION index 1d6383c8..2a025c11 100644 --- a/DESCRIPTION +++ b/DESCRIPTION @@ -57,7 +57,7 @@ Remotes: pharmaverse/formatters@main, pharmaverse/pharmaverseadam@main, pharmaverse/rlistings@main, - pharmaverse/rtables@main, + pharmaverse/rtables@1095_intermediate_nesting, pharmaverse/tern@main biocViews: Config/Needs/website: insightsengineering/nesttemplate