Getting this error:
Error in cut.default(a, breaks = 100) : 'breaks' are not unique
When trying to visualize self similarity with your plotAlign() function.
You should be able to reproduce the error using your tutorial's environment and:
alignment = globalAlign( interScaledGlobalPAM$scaledData, interScaledGlobalPAM$scaledData, scores = list(query = interScaledGlobalPAM$traj, ref = interScaledGlobalLPS$traj), sigCalc = F, numPerm = 20 ) plotAlign(alignment)
Getting this error:
Error in cut.default(a, breaks = 100) : 'breaks' are not uniqueWhen trying to visualize self similarity with your plotAlign() function.
You should be able to reproduce the error using your tutorial's environment and:
alignment = globalAlign( interScaledGlobalPAM$scaledData, interScaledGlobalPAM$scaledData, scores = list(query = interScaledGlobalPAM$traj, ref = interScaledGlobalLPS$traj), sigCalc = F, numPerm = 20 ) plotAlign(alignment)