diff --git a/configure.ac b/configure.ac
index d9a8b9a..e4ae3ed 100644
--- a/configure.ac
+++ b/configure.ac
@@ -14,7 +14,7 @@ dnl  WITHOUT ANY WARRANTY; without even the implied warranty of
 dnl  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
 dnl  General Public License for more details.
 
-AC_INIT([falco], [1.2.5], [andrewds@usc.edu],
+AC_INIT([falco], [1.3.0], [andrewds@usc.edu],
         [falco], [https://github.com/smithlabcode/falco])
 dnl the config.h is not currently #included in the source, and only
 dnl used to keep command lines short.
diff --git a/test/md5sum.txt b/test/md5sum.txt
index 94afb2f..b6638f5 100644
--- a/test/md5sum.txt
+++ b/test/md5sum.txt
@@ -1,30 +1,30 @@
-3dedc28a43582799ca5c2de6853e3b67  test_output/SRR10143153_1/fastqc_data.txt
+f20bb6ef87d70db6f5947cf18a88f8a8  test_output/SRR10143153_1/fastqc_data.txt
 9ad191925d47a57d4f8b12f21ba0a7c3  test_output/SRR10143153_1/summary.txt
-10a3ea6bdc7e89f7c554060987300a74  test_output/SRR9624732_1/fastqc_data.txt
+506b2d371e6193097da0c11b9c5c65b9  test_output/SRR9624732_1/fastqc_data.txt
 c94f94bdfbed9b83f156c15ffea84127  test_output/SRR9624732_1/summary.txt
-f3247224a624ef3e715251881cbb92d6  test_output/SRR3897196_2/fastqc_data.txt
+f845387081ee6ffc64476ed063c040bf  test_output/SRR3897196_2/fastqc_data.txt
 80cd130958bcb2219f1e5a07d06a3b6e  test_output/SRR3897196_2/summary.txt
-efe57274c57b831a35ece02a55b10b44  test_output/SRR10124060/fastqc_data.txt
+6ba4084faacba2286f2618ba6fff709c  test_output/SRR10124060/fastqc_data.txt
 776f7d1b53bbed8683de9ca1d2529f1e  test_output/SRR10124060/summary.txt
-00499da31b38353a64b3fbf865134f44  test_output/SRR3897196_1/fastqc_data.txt
+46b42c20149c52713a5927532af01010  test_output/SRR3897196_1/fastqc_data.txt
 b736ee95d5c450ef5c0dda31957b6818  test_output/SRR3897196_1/summary.txt
-f40ed230afd94501978ae4e5b4b723af  test_output/SRR6387347/fastqc_data.txt
+83c18de142891995e92d3180e323932a  test_output/SRR6387347/fastqc_data.txt
 a61f65047e76f93300967cf399d044de  test_output/SRR6387347/summary.txt
-b5b45572ad129a4306d4c1cfdea9a394  test_output/SRR1772703.lite.1/fastqc_data.txt
+5fe403277d7f952d7b396678657645a0  test_output/SRR1772703.lite.1/fastqc_data.txt
 ad5727295e7c8de6eb6874837bf1518f  test_output/SRR1772703.lite.1/summary.txt
-8241ed3eef4e21c6bc9ab6d55905c45e  test_output/SRR9878537.lite.1/fastqc_data.txt
+38150109011b3e077c46e4f5de6bc137  test_output/SRR9878537.lite.1/fastqc_data.txt
 e5c40997d4993c07e164ee5598c39cf9  test_output/SRR9878537.lite.1/summary.txt
-b513012ef040d0cb53f311d860326704  test_output/SRR9624732_2/fastqc_data.txt
+8f5cdf6d42d1d0b4926a5683637676bf  test_output/SRR9624732_2/fastqc_data.txt
 fefc5d746f853c14b5e00421ad1ec260  test_output/SRR9624732_2/summary.txt
-6583ae57d3bb86621ad8dcca23372f81  test_output/SRR1853178_2/fastqc_data.txt
+4ccfafe4c44f84e21e6493e9902dfc00  test_output/SRR1853178_2/fastqc_data.txt
 c331d0f7a6aa9d72be41ac531f9ba269  test_output/SRR1853178_2/summary.txt
-4d1ef8e0aad4027b5e59ef869cd9d196  test_output/SRR1853178_1/fastqc_data.txt
+ba7581fff57120954446233a6bc18758  test_output/SRR1853178_1/fastqc_data.txt
 36df1dcab539ba4ef885239fc8524636  test_output/SRR1853178_1/summary.txt
-b45e9f0c7840b539470d065b4bf2797c  test_output/SRR10143153_2/fastqc_data.txt
+8b86559986b08c4acdf148b412127422  test_output/SRR10143153_2/fastqc_data.txt
 19f1811f324e4c44154f659bb6e22806  test_output/SRR10143153_2/summary.txt
-88b9fabb6c5e41326b5fe93e94875893  test_output/SRR891268_2/fastqc_data.txt
+3e9665f71a36ca00d55735a0ac3c9a62  test_output/SRR891268_2/fastqc_data.txt
 20a8e50baace4c672622793874a3d7de  test_output/SRR891268_2/summary.txt
-3177a87258f3a9edd6a02a740a207b34  test_output/SRR891268_1/fastqc_data.txt
+da394ef6e494f3a21ad66fd8b205f8cf  test_output/SRR891268_1/fastqc_data.txt
 69e7d0c53cd2e67117637c408b65333a  test_output/SRR891268_1/summary.txt
-dbd6ffc33ab0c131f70db7be3398ddae  test_output/SRR6059706.lite.1/fastqc_data.txt
+af259ea040f621ef760e1ede7e681a94  test_output/SRR6059706.lite.1/fastqc_data.txt
 e348e4bcc7fc6f05e989ac7858d2b287  test_output/SRR6059706.lite.1/summary.txt