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index: use python3's sqlite3 module, not the sqlite3 CLI (#1329) - #1333

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fix/1329-sqlite3-module
Sep 25, 2026
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Fixes #1329.

axiomcode-build shelled out to the sqlite3 command-line program for the symbols check, the index_meta write and the tier summary. Stock Ubuntu and Git for Windows do not ship it, so index exited 127 after building the graph and, under set -e, skipped the fact export and rule warm-up. The next context then crashed on a missing edge.facts. All three now use python3's built-in sqlite3 module; python3 is already a stated requirement.

Validation: Linux container with no sqlite3 CLI. Results follow in a comment.

axiomcode-build shelled out to the sqlite3 command-line program in four
places. Stock Ubuntu and Git for Windows do not ship it, so index exited
127 after building the graph and, under set -e, skipped the fact export
and rule warm-up, which then crashed context on a missing edge.facts.
python3 is already a stated requirement and carries sqlite3 itself.
@swapnilpaliwal-sd
swapnilpaliwal-sd merged commit 47fd6c3 into dev Sep 25, 2026
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@swapnilpaliwal-sd
swapnilpaliwal-sd deleted the fix/1329-sqlite3-module branch September 25, 2026 18:34
swapnilpaliwal-sd added a commit that referenced this pull request Sep 25, 2026
* parser/readme: C# and TypeScript are documented, and usage, output and tests match the code (#1321)

* parser/readme: C# and TypeScript are documented, and usage, output and tests match the code
* parser/readme: nested type names and the spellings a query still meets
* parser: a description that does not list languages, so it cannot go stale

* index: use python3's sqlite3 module, not the sqlite3 CLI (#1329) (#1333)

* index: use python3's sqlite3 module, not the sqlite3 CLI (#1329)

axiomcode-build shelled out to the sqlite3 command-line program in four
places. Stock Ubuntu and Git for Windows do not ship it, so index exited
127 after building the graph and, under set -e, skipped the fact export
and rule warm-up, which then crashed context on a missing edge.facts.
python3 is already a stated requirement and carries sqlite3 itself.

* release: 0.1.1 (#1329); the vendored parser keeps 0.1.0

* windows: find Python as the MCP launcher does, and give bash a python3 that runs it (#1331) (#1334)

* windows: find Python the way the MCP launcher does, and give bash a python3 that runs it (#1331)

A python.org install on Windows has python.exe and py.exe and no python3, and on a
desktop Windows python3 is the Store placeholder. Every CLI verb and every hook
called python3, so all of them failed although Python was installed.

- mcp/find-python.js: AXIOMCODE_PYTHON, python3, python, py -3; the first that runs,
  by its sys.executable. launch.js now takes its list from here.
- bin/axiomcode.js and launch.js put scripts/pyshim/python3 first on bash's PATH,
  pointing at that interpreter (always on Windows, and elsewhere when python3 is not
  the one chosen).
- hooks: every command is node hooks/run.js <hook>.py, which passes stdin, stdout,
  stderr and the exit status through unchanged, and exits 0 when there is no Python
  so a hook never blocks a tool.
- scripts/axiomcode makes the same choice when run straight from a shell, as the
  skill says to without MCP tools.
- Python-started builds use AXIOMCODE_BASH when set, as server.py already does.
- tests/python_names.py: 7 checks, all red on dev; manifests.py requires the runner.
- version 0.1.1.

* ax_fresh: Git Bash's fd 9 is not a descriptor in native python.exe, so the build lock looped forever (#1331)

tests/README.md is left as it was.

* windows: run Python in UTF-8 mode, so a piped answer with → does not raise UnicodeEncodeError (#1331)

* graph: run axiomcode-build through bash; Windows cannot exec a script (#1331)

* parser stays at 0.1.0

* version.mjs: the vendored parser keeps its own version

* graph: a small repository opens as clean as a large one, and no label covers another (#1336) (#1337)

The chip thresholds compared the absolute zoom, and a small disc is fitted
at a zoom that already passed all of them, so every node was labelled on
open. They now count from the zoom fitAll chose. chip() skips a box that
overlaps one already drawn; the hover and the selection always draw. Only
the ambient chips give way to the rim package labels, so a selection's
callers and callees stay labelled. The pass that labelled every node when
fewer than 500 were shown is removed.

readme: an image of the graph under "Why AxiomCode Graph?", one method
selected with its resolved calls drawn across the codebase.

* README: replace the graph screenshot with the test-impact graph (#1338)

* README: replace the Spring graph screenshot with the test-impact graph

* README: transparent corners on the impact graph image

* path --every: bound the route enumeration by work, not only by routes found (#1341) (#1342)

Through a cycle the partial routes multiply with every hop, and when fewer than
max_paths short routes exist the heap grew until the machine ran out of memory.
The search now stops after AXIOMCODE_EVERY_BUDGET partial routes (200,000) and
says so, with how to narrow an endpoint.

* windows: the index stores '/' paths on every platform, so context and --in find their scopes (#1340) (#1343)

rel() built the index's paths with os.path.relpath, which uses the platform
separator, while every reader of the index splits on '/'. On Windows context
found no scope and exited 2. The indexer, the hooks and the verbs now build
'/'-separated keys, and --in accepts a path written with backslashes.

* engines: ship the query programs compiled, so impact and path need no Soufflé (#1330) (#1335)

build-engines compiles impact.dl, path.dl, path-opt.dl and path-every.dl on all five
platforms next to the language engines, keyed by dl_program.py's own rules id, and checks
each platform's binaries against the interpreter on a small fixture. The engine package
ships them under queries/, dl_program.py uses the one built from these rules before it
tries a local compile, and publish refuses a platform that lacks them. The nightly e2e now
indexes, runs impact and path from the installed tarballs with no souffle on PATH.

A local dl/.cache no longer reaches the npm package.

* path --every: list routes with Yen's k-shortest paths, count them up to 1000 (#1341) (#1344)

#1342 stopped the enumeration after a fixed amount of work, which kept memory
bounded but cut the route list short: on a cyclic subgraph it printed one route
where far more exist. Yen's algorithm finds each next-shortest simple route with
a bounded number of breadth-first searches, so the work grows with the routes
asked for and the ones printed are exactly the shortest. --every counts routes
up to 1000, prints the shortest --paths N (20), and past 1000 says so and asks
for a narrower endpoint.

* ci: the way into main installs the packages on all five platforms and checks every verb's answer (#1347)

* ci: the way into main installs the packages on all five platforms and runs every verb

A pull request into main now packs @axiomcode/code-graph once, and on linux-x64,
linux-arm64, win32-x64, darwin-arm64 and darwin-x64 installs it with that
platform's engine package, with no Soufflé, and for every language indexes a
case and runs impact, test-impact, path (SQL and Datalog), path --every (both)
and context. The required CI check fails unless every platform passes, so a
release is never cut from a main that has not done this.

* e2e: every query verb must return the answer a tiny project makes true, in all five languages

.github/e2e/<language> is entry() -> helper() -> leaf() and one test calling
entry(). e2e-queries.sh indexes it and requires: impact leaf lists helper as a
resolved caller; path entry leaf reaches it through helper, from SQL and from
the shipped Datalog programs; --every lists a route through helper; context
names leaf; and after a real edit to leaf, changed names it and test-impact
selects the test through the graph, not by its name. A non-zero exit or a
traceback fails. Removing the call, or the test's call, turns it red.

* context: a tree with every file at its root is scoped to the root, not refused (#1345) (#1346)

The scope menu is built from the directories above the indexed files, so a
repository whose files sit at its root had nothing to offer, and context refused
with an empty list of suggestions. The root is the one scope such a tree has:
context now uses it and says so, the way a single-package tree is handled.

---------

Co-authored-by: github-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com>
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index: exits 127 on a clean machine because it needs the sqlite3 command-line program

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