BIOKT Group

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1. MasterMSM MasterMSM Public

   Python package for generating Markov state models

   Python 17 7

2. MartiniSurf MartiniSurf Public

   MartiniSurf: a package for the preparation of Martini simulations of immobilized proteins

   Python 4 1

3. AdaptiveMasterMSM AdaptiveMasterMSM Public

   Adaptive sampling implementation interacting with MasterMSM

   Python 3 2

4. PLUMED-docs PLUMED-docs Public

   Working examples of different types of molecular dynamics simulations that can be run using Gromacs patched with PLUMED

   Jupyter Notebook 1

5. Skills-BIOKT Skills-BIOKT Public

   Python 1 1

6. claude-biokt-slides claude-biokt-slides Public

   Claude Code seminar slides for biomolecular simulation and computational chemistry

   TeX 1