Skip to content

Add field with membrane label to the predicted particle STAR files #50

Description

@rdrighetto

The particle STAR files generated by the predict step should contain an additional column mbnMembraneId with the label of that membrane, which would be preserved by RELION upon importing. Something like:

data_particles

loop_
_rlnTomoName #1
_rlnTomoImportParticleFile #2
_mbnMembraneId #3 Optional membrane label
tomo_0001  membrain-pick/membrain_pick_output/Tomo0001_T1S1M12_clusters.star T1S1M12
tomo_0001  membrain-pick/membrain_pick_output/Tomo0001_T1S1M14_clusters.star T1S1M14
tomo_0001  membrain-pick/membrain_pick_output/Tomo0001_T1S1M16_clusters.star T1S1M16
tomo_0001  membrain-pick/membrain_pick_output/Tomo0001_T1S1M17_clusters.star T1S1M17

Activity

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Metadata

Metadata

Assignees

No one assigned

    Labels

    enhancementNew feature or request

    Type

    No type

    Projects

    No projects

      Milestone

      No milestone

      Relationships

      None yet

      Development

      No branches or pull requests

      Issue actions