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UberSeg end to end on #933's tile detection (SEG_VIGNET from the tile SExtractor run) - #925

Merged

cailmdaley merged 91 commits into

developfrom

feat/uberseg-seg-vignet

Oct 25, 2026

Merged

UberSeg end to end on #933's tile detection (SEG_VIGNET from the tile SExtractor run)#925
cailmdaley merged 91 commits into
developfrom
feat/uberseg-seg-vignet

Commits on Sep 26, 2026
- test(ngmix): specify defect fill, epoch cuts and shear recovery near defects
  
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- feat(ngmix): noise-fill defects under every BLEND_HANDLING, veto central ones
  
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- ngmix: read each epoch's OFFSET from the object dict in hand
  
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- tests: name the none-mode uberseg test for none, not noisefill
  
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- test(ngmix): specify DEFECT_FILL = interpolate and its shear recovery
  
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- feat(ngmix): DEFECT_FILL = interpolate, with a fill-dependent central veto
  
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Commits on Sep 28, 2026
- Merge origin/develop into feat/defect-fill-veto
  
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- Merge origin/feat/defect-fill-veto into feat/defect-interpolation
  
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Commits on Sep 29, 2026
- Merge origin/develop into rebuild/masked-pixels
  
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- ngmix: restore the BLEND_HANDLING name noisefill
  
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- test(ngmix): specify neighbour markers apart from defects
  
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- fix(ngmix): keep SExtractor's neighbour markers out of the defect set
  
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- fix(ngmix): off-tile pixels are defects, not neighbours
  
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- fix(ngmix): interpolate defects from the pixels the image keeps
  
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- fix(ngmix): the defect fill keeps the stamp's dtype
  
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- Merge remote-tracking branch 'origin/develop' into rebuild/masked-pixels
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Commits on Sep 30, 2026
- fix(ngmix): off-tile pixels are the marked rows and columns at the stamp border
  
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- docs: -1e30 tile-VIGNET markers come from SExtractor or the catalogue converter
  
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- Expand ${VAR:-default} in config values
  
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- Write SEG_VIGNET from the catalogue-mode converter
  
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- Write SEG_VIGNET from the tile SExtractor run
  
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- ngmix: read UberSeg's seg stamps from the tile catalogue's SEG_VIGNET
  
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- Carry blend_handling to tile_detect and ngmix as two prologue exports
  
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- make_cat: leave SEG_VIGNET out of final_cat, with VIGNET
  
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- astra.yaml: UberSeg reads the tile catalogue's SEG_VIGNET
  
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- Drop inherited blend variables before any rule
  
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- Centre SExtractor-mode SEG_VIGNET on X/Y_IMAGE_DBL
  
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- Point the stale SEG_VIGNET_PATH message and astra note at SEG_VIGNET
  
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- Make UberSeg the default blend handling
  
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- Measure windowed centroids for UNIONS-catalogue tiles
  
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- Windowed centroid: mirror no-data pixels, guard NaN and wild FLUX_RADIUS
  
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Commits on Oct 1, 2026
- Revert the windowed-centroid port
  
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- Merge origin/develop into fix/dr6-windowed-positions
  
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- Config values expand ${VAR:-default}
  
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- sextractor_runner: join detections to an external catalogue
  
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- Detect tiles with SExtractor on data too; drop the catalogue converter
  
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- Merge origin/develop into fix/dr6-windowed-positions
  
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- sextractor_runner: single-image SExtractor without a detection image
  
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- match_catalogue: two-sided pairing guard; record the eight-tile validation
  
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- Config expansion rejects malformed ${ forms
  
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- tile_detect: 1 core, 4 GB, 20 min from eight measured tiles
  
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- Update the params pin for this campaign boundary
  
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- Tile SExtractor: MEMORY_PIXSTACK 3000000, so no object is truncated
  
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- match_catalogue: guard at 2% beyond 20 unpaired per side
  
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  5983208
- Merge origin/feat/uberseg-seg-vignet (#925) onto #933's tile detection
  
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- SEG_VIGNET keeps own-vs-other through the DR6 join
  
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- tile_detect: 3000 MB more under uberseg for SEG_VIGNET
  
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- Update the params pins for UberSeg on #933's detection
  
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Commits on Oct 2, 2026
- tile.smk: keep the catalogue path on one line, as the tile-detection test reads it
  
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- SEG_VIGNET centres as SExtractor centres VIGNET: (int)(mx + 0.49999)
  
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- match_catalogue: refuse NUMBERs the int32 columns cannot hold
  
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- ngmix: each chunk holds only its own rows' tile stamps
  
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- Merge origin/develop (#933 squashed, #927) into feat/uberseg-seg-vignet
  
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- Merge origin/develop into feat/masked-pixels
  
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- Masked-pixel figures for #922: pixel classes on a synthetic and a real DR6 blend, and a defect-type gallery
  
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- Defect gallery from real DR6 epochs; dr6_epochs.py scans an exposure for every defect type
  
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- ngmix: one weight-symmetrization step, SYMMETRIZE_WEIGHTS names the classes it covers
  
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- ngmix: interpolation is the only defect fill, and the veto reads the fill's interpolated set
  
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- CI: run tests/science once, in its own step
  
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- ngmix: one-orientation defect interpolant; interpolated_defects names the set
  
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- masked-pixel figures: one defect treatment, off-tile as zero weight
  
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Commits on Oct 3, 2026
- Bias-vs-distance figure for one defect: production treatment per defect type, noise fill as counterfactual
  
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- ngmix: epoch masked-fraction cut at 10%, matching DES
  
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- bias_vs_distance: legend names the masked-fraction cut from its constant
  
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- ngmix: noise-fill central veto at 13 px, covering the 0.7" galaxy through a 0.9" PSF
  
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- ngmix: DEFECT_WEIGHTING option; noise image interpolated in fixnoise's frame
  
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- ngmix: per-object defect diagnostics in the shape catalogue
  
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Commits on Oct 5, 2026
- Merge origin/develop into feat/masked-pixels
  
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- Plain-language defect_fill rationale; name DEFECT_WEIGHTING's default
  
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- Merge origin/develop into feat/uberseg-seg-vignet
  
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- Merge feat/masked-pixels (#922) into feat/uberseg-seg-vignet
  
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- Merge perf/ngmix-chunk-rows (#940) into feat/uberseg-seg-vignet
  
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- des_y6: interpolate a quarter-turn copy only where the interpolant reaches it
  
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- Merge feat/masked-pixels (des_y6 copy fix) into feat/uberseg-seg-vignet
  
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- ngmix: a failed epoch drops that epoch, not the object
  
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- Merge feat/masked-pixels (#922, failed-epoch drop) into feat/uberseg-seg-vignet
  
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- ngmix: neighbours are markers on another object's segmentation footprint
  
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Commits on Oct 9, 2026
- ngmix: DEFECT_FILL run-config knob (interpolate | noise)
  
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- Merge feat/masked-pixels (DEFECT_FILL knob) into feat/uberseg-seg-vignet
  
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Commits on Oct 10, 2026
- tile_detect: build the catalogue in memory, run SExtractor on node-local disk (#947)
  
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- Merge develop into feat/masked-pixels; regenerate params pin
  
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- Merge feat/masked-pixels (with develop) into feat/uberseg-seg-vignet; regenerate params pins
  
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- Regenerate params pins after merging develop
  
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- Merge develop (#887) into feat/masked-pixels; regenerate params pin
  
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- Merge feat/masked-pixels (develop with #887) into feat/uberseg-seg-vignet; regenerate params pins
  
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Commits on Oct 12, 2026
Commits on Oct 25, 2026
- Merge origin/develop into feat/uberseg-seg-vignet
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- params pins regenerated for feat/uberseg-seg-vignet on develop 902c32ff
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