Skip to content
Navigation Menu
Sign in
Appearance settings
Platform
AI CODE CREATION
GitHub Copilot
Write better code with AI
GitHub Copilot app
Direct agents from issue to merge
MCP Registry
Integrate external tools
DEVELOPER WORKFLOWS
Actions
Automate any workflow
Codespaces
Instant dev environments
Issues
Plan and track work
Code Review
Manage code changes
Code Quality
Enforce quality at merge
APPLICATION SECURITY
GitHub Advanced Security
Find and fix vulnerabilities
Code security
Secure your code as you build
Secret protection
Stop leaks before they start
EXPLORE
Why GitHub
Documentation
Blog
Changelog
Marketplace
View all features
Solutions
BY COMPANY SIZE
Enterprises
Small and medium teams
Startups
Nonprofits
BY USE CASE
App Modernization
DevSecOps
DevOps
CI/CD
View all use cases
BY INDUSTRY
Healthcare
Financial services
Manufacturing
Government
View all industries
View all solutions
Resources
EXPLORE BY TOPIC
AI
Software Development
DevOps
Security
View all topics
EXPLORE BY TYPE
Customer stories
Events & webinars
Ebooks & reports
Business insights
GitHub Skills
SUPPORT & SERVICES
Documentation
Customer support
Community forum
Trust center
Partners
View all resources
Open Source
COMMUNITY
GitHub Sponsors
Fund open source developers
PROGRAMS
Security Lab
Maintainer Community
GitHub Stars
Archive Program
REPOSITORIES
Topics
Trending
Collections
Enterprise
ENTERPRISE SOLUTIONS
Enterprise platform
AI-powered developer platform
AVAILABLE ADD-ONS
GitHub Advanced Security
Enterprise-grade security features
Copilot for Business
Enterprise-grade AI features
Premium Support
Enterprise-grade 24/7 support
Pricing
Search
/
Sign in
Sign up
Appearance settings
You signed in with another tab or window.
Reload
to refresh your session.
You signed out in another tab or window.
Reload
to refresh your session.
You switched accounts on another tab or window.
Reload
to refresh your session.
Dismiss alert
{{ message }}
Uh oh!
There was an error while loading.
Please reload this page
.
DavidsonGroup
/
flexiplex
Public
Notifications
You must be signed in to change notification settings
Fork
5
Star
46
Code
Issues
9
Pull requests
2
Discussions
Actions
Projects
Security and quality
0
Insights
Additional navigation options
Code
Issues
Pull requests
Discussions
Actions
Projects
Security and quality
Insights
Allow multiple barcode segments (e.g. split-seq)
- #75
#75
Draft
ChangqingW
wants to merge 10 commits into
DavidsonGroup:main
DavidsonGroup/flexiplex:main
from
ChangqingW:feat-multi-bc
ChangqingW/flexiplex:feat-multi-bc
Copy head branch name to clipboard
Conversation
Commits
10
(10)
Checks
Files changed
Draft
Allow multiple barcode segments (e.g. split-seq)
#75
ChangqingW
wants to merge 10 commits into
DavidsonGroup:main
DavidsonGroup/flexiplex:main
from
ChangqingW:feat-multi-bc
ChangqingW/flexiplex:feat-multi-bc
Copy head branch name to clipboard
Commits
Commits on Jan 16, 2026
change to thread safe queue
ChangqingW
committed
e122cc1
View commit details
Copy full SHA for e122cc1
Browse repository at this point
allow multiple barcode / umi
ChangqingW
committed
f14b99d
View commit details
Copy full SHA for f14b99d
Browse repository at this point
trim off multi-matching bits; better UMI locations
ChangqingW
committed
a842fad
View commit details
Copy full SHA for a842fad
Browse repository at this point
Commits on Jan 19, 2026
add splitted barcode support
ChangqingW
committed
453e914
View commit details
Copy full SHA for 453e914
Browse repository at this point
Commits on Jan 22, 2026
split extract_features into more functions
ChangqingW
committed
93ba28c
View commit details
Copy full SHA for 93ba28c
Browse repository at this point
Add discovery mode for split barcode
ChangqingW
committed
9e1cfa2
View commit details
Copy full SHA for 9e1cfa2
Browse repository at this point
Add writer thread
Show description for cecf8e2
ChangqingW
committed
cecf8e2
View commit details
Copy full SHA for cecf8e2
Browse repository at this point
Commits on Jan 23, 2026
formatting, misc
ChangqingW
committed
a406bc5
View commit details
Copy full SHA for a406bc5
Browse repository at this point
Commits on Feb 4, 2026
keep output order, move all barcodes to CB
Show description for 617ea7d
ChangqingW
committed
617ea7d
View commit details
Copy full SHA for 617ea7d
Browse repository at this point
WIP: perfer match with samller wiggle
ChangqingW
committed
267d806
View commit details
Copy full SHA for 267d806
Browse repository at this point
You can’t perform that action at this time.