Skip to content

Updated docs and added method in core.py#276

Open
elenikiachaki wants to merge 4 commits into
fix263_overhaulfrom
fix274_update_docs
Open

Updated docs and added method in core.py#276
elenikiachaki wants to merge 4 commits into
fix263_overhaulfrom
fix274_update_docs

Conversation

@elenikiachaki
Copy link
Copy Markdown
Collaborator

This PR addresses #274.

The printed outputs shown in tutorial.md were not consistent with the actual outputs I got when running tutorial.py, so I updated them. I’m not sure whether the documented outputs were outdated, came from a different protein/example, or if there is an issue in the current code and I am not getting the same results..

I also noticed that some print examples shown in tutorial.md were not actually printed by tutorial.py, so I added the corresponding print commands to the script.

Examples of outputs I could not reproduce and I am not sure where they are coming from:

>>> seq.positions[45].properties
{'ptm_glycosylation': <PositionProperty Glycosylation Site from GlyGen>}

>>> seq.positions[45].properties['ptm_glycosylation'].metadata
{'subtypes': ['N-GlcNAc', 'O-GalNAc']}

>>> seq.positions[10].properties['mobidb_disorder_propensity']
<StructuralDisorder, Structured, observed>

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

None yet

Projects

None yet

Development

Successfully merging this pull request may close these issues.

1 participant