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1. BayesTensor BayesTensor Public

   A scalable PyTorch framework using Amortized Variational Inference to perform Bayesian Tensor Factorization on massive single-cell spatial transcriptomics datasets.

   Python

2. tcgnn-surveillance tcgnn-surveillance Public

   Topological Causal Graph Neural Networks (TCGNN) for Detecting Structural Voids in Epidemiological Surveillance.

   Python

3. topobench topobench Public

   Forked from geometric-intelligence/topobench

   TopoBench is a Python library designed to standardize benchmarking and accelerate research in Topological Deep Learning

   Python

4. CausTab CausTab Public

   Gradient Variance Regularization for Causal Invariant Representation Learning on Tabular Data

   Python

5. tda-foundation-models tda-foundation-models Public

   Topological probing of ESM-2 latent geometry under distribution shift, with CausTab-grounded invariant feature analysis across protein family environments.

   Python

6. hic-persistent-homology hic-persistent-homology Public

   Persistent homology pipeline for chromatin loop and TAD detection from Hi-C contact matrices, built for parallel fan-out across chromosomes, resolutions, and replicates.

   Python