Maint

[GavinHuttley]

Summary by Sourcery

Update project metadata, supported Python versions, CI matrices, and documentation assets.

Bug Fixes:

• Correct a typo in the pytest marker description for image-drawing tests.

Enhancements:

• Raise the minimum supported Python version to 3.11 and add support up to Python 3.14 in both project metadata and classifiers.
• Reformat pyproject configuration for consistency and clarity, including optional dependencies and ruff per-file ignores.
• Update the README logo image URL and document the Chrome dependency for Plotly static image export.

CI:

• Adjust CI test and release matrices to run against Python 3.11–3.14.

Documentation:

• Refresh README with a new logo asset and note about Chrome requirements for Plotly image export.

[sourcery-ai]

Reviewer's Guide

Maintenance update that refreshes supported Python versions, tidies project metadata and optional dependencies, fixes a pytest marker typo, and updates documentation assets and CI workflows to match the new support matrix.

Flow diagram for installation and static image export requirement

flowchart TD
  User["User"] --> Install["Run pip install mutation_motif"]
  Install --> UseCLI["Use mm CLI to create Plotly figures"]
  UseCLI --> NeedStatic["Need static image export"]
  NeedStatic --> ChromeDep["Install Chrome for Plotly static image export"]

Loading

File-Level Changes

Change	Details	Files
Update project metadata in pyproject.toml to reflect new Python support range and clean up configuration formatting.	Change requires-python constraint from >=3.10,<3.14 to >=3.11,<=3.14 and adjust trove classifiers to drop 3.10 and add 3.14 Reformat authors, keywords, dependencies, optional test/dev dependencies, and pytest markers into compact, consistently styled TOML arrays Deduplicate and tidy ruff per-file ignores and inline comments for better readability	pyproject.toml
Refresh README assets and installation notes to match current tooling requirements.	Update project logo image URL to a GitHub user-attachments asset Add a note that static Plotly image export requires Chrome installation, with a link to Plotly documentation	README.md
Align GitHub Actions CI and release workflows with the updated Python support policy.	Adjust release workflow to test Python 3.11–3.14 instead of 3.10–3.13 Adjust testing_develop workflow matrix to test 3.11 and 3.14 instead of 3.10 and 3.13 across macOS and Ubuntu	.github/workflows/release.yml .github/workflows/testing_develop.yml

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[sourcery-ai]

Hey - I've found 1 issue, and left some high level feedback:

• In pyproject.toml the dependencies list still contains scipy twice; consider removing the duplicate entry to avoid confusion.
• You’ve set requires-python = ">=3.11,<=3.14" while also adding a 3.14 classifier and CI job; if the intention is simply “3.11+ until the next incompatible release,” using <3.15 instead of <=3.14 may reduce the need for frequent metadata updates.

Prompt for AI Agents

Please address the comments from this code review:

## Overall Comments
- In `pyproject.toml` the `dependencies` list still contains `scipy` twice; consider removing the duplicate entry to avoid confusion.
- You’ve set `requires-python = ">=3.11,<=3.14"` while also adding a 3.14 classifier and CI job; if the intention is simply “3.11+ until the next incompatible release,” using `<3.15` instead of `<=3.14` may reduce the need for frequent metadata updates.

## Individual Comments

### Comment 1
<location path=".github/workflows/testing_develop.yml" line_range="16-19" />
<code_context>
       matrix:
         os: [macos-latest, ubuntu-latest]
-        python-version: ["3.10", "3.13"]
+        python-version: ["3.11", "3.14"]

     steps:
</code_context>
<issue_to_address>
**suggestion (testing):** Consider including all supported Python versions in the develop test matrix.

The metadata and release workflow list support for 3.11–3.14, but this workflow only runs 3.11 and 3.14. Unless there’s a specific reason to omit 3.12 and 3.13, adding them to the matrix would better cover version-specific issues.

```suggestion
    strategy:
      matrix:
        os: [macos-latest, ubuntu-latest]
        python-version: ["3.11", "3.12", "3.13", "3.14"]
```
</issue_to_address>

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