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Fixes for ggplot2 version 4 and ggcyto breaking changes - #12

Merged

NKInstinct merged 16 commits into

NKInstinct:masterfrom

DavidRach:master

Jul 2, 2026

Merged

Fixes for ggplot2 version 4 and ggcyto breaking changes#12
NKInstinct merged 16 commits into
NKInstinct:masterfrom
DavidRach:master

Commits on Dec 1, 2025
- Hi Andrew/Harvey, just testing whether I can get rid of the @import in favor of @importFrom and still have everything work. Will pull request any useful changes (and some additional unit test). Bes…
  DavidRach
  committed
  cb5b56a
Commits on Feb 21, 2026
Commits on Apr 4, 2026
- Missing description file comma
  DavidRach
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  d84ac97
Commits on Apr 16, 2026
- Rollback requirement to R >= 4.4 for Cytometry in R class
  DavidRach
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  37b6ce1
Commits on Jun 20, 2026
Commits on Jun 21, 2026
- SpanGate adjustments and openCyto template exports are operational
  DavidRach
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  36d8576
Commits on Jun 27, 2026
- Incorporation of additional metadata columns to pData was causing gateClose to break. Reason is they were ending up within gg$data, which threw off the fix instituted following ggcyto break in the …
  DavidRach
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  082aff7
- AdjustAll argument for applyGateCloseSwap to adjust all specimens within a GatingSet in one go if so desired
  DavidRach
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  ec1f1b9
Commits on Jun 28, 2026
- Quality of life change for the Shiny, when only one-dimension provided, updates Radio Button to select spanGate
  DavidRach
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  2c582bc
Commits on Jul 2, 2026
- Brough over Bioconductor flowGate version 1.13.1 differences to bring both GitHub and Bioconductor brances to being equivalent (except for preparePlot, which still double checking with unit tests f…
  DavidRach
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  5cca8dd