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⚡ Bolt: [performance improvement] - #35

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chemo_mito_grow_steppablesfrom
bolt-performance-fix-11893593931792308179
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⚡ Bolt: [performance improvement]#35
NoWon1 wants to merge 1 commit into
chemo_mito_grow_steppablesfrom
bolt-performance-fix-11893593931792308179

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@NoWon1

@NoWon1 NoWon1 commented Jul 24, 2026

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💡 What: Removed nested try...except blocks within tightly nested spatial loops in safe_cell_removal and check_ecm_contact in favor of explicit dynamic boundary checks (self.dim.x and self.dim.y). Added explanatory comments as requested.

🎯 Why: In CompuCell3D, out-of-bounds SWIG object lookups throw exceptions that incur significant overhead. Bounding the variables logically prevents this much faster than exception handling on each iteration.

📊 Impact: Reduces overhead caused by try...except block evaluation across every pixel visited in search radii, improving loop execution time significantly.

🔬 Measurement: Added a unit test suite to verify cell removal and ECM contact logic still cleanly pass and handle edge conditions.


PR created automatically by Jules for task 11893593931792308179 started by @NoWon1

Co-authored-by: NoWon1 <126711057+NoWon1@users.noreply.github.com>
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👋 Jules, reporting for duty! I'm here to lend a hand with this pull request.

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Copilot AI review requested due to automatic review settings July 24, 2026 15:46

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2 participants