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PMCC - Bioinformatics Core

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  1. janis janis Public

    [Alpha] Janis: an open source tool to machine generate type-safe CWL and WDL workflows

    Python 44 12

  2. janis-core janis-core Public

    Core python modules for Janis Pipeline workflow assistant

    Common Workflow Language 5 10

  3. python-wdlgen python-wdlgen Public

    Python classes to loosely generate WDL

    Python 3 2

  4. janis-workshops janis-workshops Public

    Workshops for the Janis pipeline framework

    Python 3 4

  5. CONTRA CONTRA Public

    Python 3 1

  6. janis-bioinformatics janis-bioinformatics Public

    Repository of bioinformatics tools for the pipelines module

    Python 2 10

Repositories

Showing 10 of 25 repositories
  • intro-to-nextflow-2026 Public

    Intro to Nextflow Workshop 2026

    PMCC-BioinformaticsCore/intro-to-nextflow-2026's past year of commit activity
    0 CC-BY-4.0 0 0 0 Updated Jul 20, 2026
  • mihcro Public

    PMCC microscopy image processing

    PMCC-BioinformaticsCore/mihcro's past year of commit activity
    Nextflow 1 MIT 0 0 0 Updated Mar 11, 2026
  • janis-core Public

    Core python modules for Janis Pipeline workflow assistant

    PMCC-BioinformaticsCore/janis-core's past year of commit activity
    Common Workflow Language 5 GPL-3.0 10 18 4 Updated Jan 13, 2026
  • macpie Public

    R package for High-Throughput Transcriptomics

    PMCC-BioinformaticsCore/macpie's past year of commit activity
    R 1 0 0 3 Updated Nov 24, 2025
  • nextflow-intro-workshop Public

    Introduction to Nextflow and Running nf-core Workflows Workshop

    PMCC-BioinformaticsCore/nextflow-intro-workshop's past year of commit activity
    CSS 0 MIT 0 0 0 Updated Aug 15, 2025
  • dinoflow Public

    Nextflow workflow for MAC-seq

    PMCC-BioinformaticsCore/dinoflow's past year of commit activity
    Groovy 0 MIT 2 0 0 Updated Jul 23, 2025
  • nextflow-nf-core-workshop-2025_v2 Public Forked from PMCC-BioinformaticsCore/nextflow-nf-core-workshop-2025

    Nextflow and nf-core workshop 2025

    PMCC-BioinformaticsCore/nextflow-nf-core-workshop-2025_v2's past year of commit activity
    HTML 1 MIT 2 0 0 Updated May 28, 2025
  • nextflow-nf-core-workshop-2025 Public

    Nextflow and nf-core workshop 2025

    PMCC-BioinformaticsCore/nextflow-nf-core-workshop-2025's past year of commit activity
    0 MIT 2 0 1 Updated Apr 17, 2025
  • AI_Beyond_Omics_Workshop Public Forked from Sanduni-P/AI_Beyond_Omics_Workshop

    This workshop is scheduled to take place at the The annual Australian Bioinformatics and Computational Biology Society (ABACBS) conference 2024 at University of Sydney on 7th November 2024. This workshop aims to explore the broad applications of artificial intelligence (AI) technologies that are relevant to bioinformaticians.

    PMCC-BioinformaticsCore/AI_Beyond_Omics_Workshop's past year of commit activity
    SCSS 0 1 0 0 Updated Nov 6, 2024
  • janis Public

    [Alpha] Janis: an open source tool to machine generate type-safe CWL and WDL workflows

    PMCC-BioinformaticsCore/janis's past year of commit activity
    Python 44 GPL-3.0 12 13 2 Updated Sep 17, 2023
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