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PardoEdgar/README.md

About me

Computational biologist and data scientist focused on understanding ecosystem resilience and managing sustainable use through computer vision, machine learning, and statistical modeling. I have developed automated pipelines for the large-scale extraction and analysis of animal cardiovascular physiology, coral reef monitoring, plant anatomy, and environmental sensor data, integrating experimental biology with computational approaches. These pipelines have improved data precision and accuracy while reducing data extraction and processing time by up to 80%. My interests focus on transforming large volumes of complex biological data into new tools for environmental monitoring and the sustainable use of marine ecosystems.

  • Biologist, Universidad del Rosario.
  • Smithsonian Tropical Research Institute (STRI)

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  1. snail-cardiac-activity snail-cardiac-activity Public

    Cardiac activity analysis in Cornu aspersum under experimentally induced behavioral states

    R 1

  2. py-Heart-ROI-Analyzer py-Heart-ROI-Analyzer Public

    Python tool for extracting pixel intensity and heart function data from cardiac videos using ROI selection via OpenCV.

    Python 1

  3. Characterization-of-microbiota-during-different-physiological-states-in-Cornu-aspersum Characterization-of-microbiota-during-different-physiological-states-in-Cornu-aspersum Public

    16S microbiota analysis of Cornu aspersum across physiological states (active, aestivation, post-aestivation). Quality control with NanoStat, taxonomic assignment with Kraken2, and statistical anal…

    R

  4. CNN_Roolemsels CNN_Roolemsels Public

    Graphical user interface for Xylem vessels segmentation from root transversal sections in monocots using CNN U-net Artificial intelligence

    Python 1