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  1. microbe-mcp microbe-mcp Public

    16S/ITS downstream microbiome analysis MCP via local Rscript (alpha/beta, composition, differential abundance, networks).

    R

  2. plant-public-mcp plant-public-mcp Public

    Plant pathology public APIs MCP: UniProt, NCBI, InterPro, PDB, AlphaFold, Ensembl Plants, Sol Genomics.

    Python

  3. rnaseq-plot-mcp rnaseq-plot-mcp Public

    RNA-seq downstream plotting MCP: local Rscript (DESeq2/edgeR/limma, volcano, heatmap, GSEA, WGCNA) to png+pdf.

    R