docs: updating tutorial for COMBINE25 - #421

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ntalluri:tutorial

Oct 21, 2025

Commits on Oct 14, 2025

updated beginner
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7e1e912
Merge branch 'main' of github.com:ntalluri/spras into tutorial
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83da105
updating the introduction to better explain pathway reconstruction and SPRAS
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96bc8b6
updating the install and config part
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ed8d8dc
fixing the first part of step 2 in beginner
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c4239bd
add in warning about Docker images and containers
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7970872
add in one more command
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d0f503a
add in one more options to command
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52aa055
updated beginner's format and wording more
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10a65f8
added dockerhub link to the algortihm images and add spras overview image
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0c2bbe3

Commits on Oct 15, 2025

Commits on Oct 16, 2025

fixed formatting
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f3e7f9e
updated intermediate tutorial with data part, added images, updated beginner slightly
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875057b
edit references and add a todo to the unsused rst
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528af72

Commits on Oct 17, 2025

removing plannign document
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68fad39
outline for advanced
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5f2cfe3
added images for advanced
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2a3f332
Apply suggestions from code review

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tristan-f-r
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7af4237
Merge branch 'tutorial' of github.com:ntalluri/spras into tutorial
ntalluri
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49cc49b
added some periods
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c2098df
update intermediate with more images and information
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099f2c4
added the CHTC integration part
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c46cafe

Commits on Oct 18, 2025

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135dfbf

Commits on Oct 19, 2025

added alt text, updated erbb pathway, and made images larger
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3043cbe
add back some parts of the intro
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bbe5e40
make the pathway reconstruction algo tagline better
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496c0af
add in to the files paths and updated a comment
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32c86d4
Merge branch 'main' of github.com:ntalluri/spras into tutorial
ntalluri
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b47be5f
added in final suggestions from code review
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3610e0b
more the docker trouble shooting to be a general trouble shooting page
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4adaf38

Commits on Oct 21, 2025

Delete docs/troubleshooting.rst
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58c4478
Apply final suggestions from code review

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agitter
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3b08ebd