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docs: retrofit architecture documentation to multi-DNA reality (#113) - #116

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docs: retrofit architecture documentation to multi-DNA reality (#113)#116
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Summary

Implements #113: retrofits the architecture documentation to the multi-DNA reality (Lobby DNA #103, Group DNA #107, DHT-backed UI #111, NDO DNA #112 in flight). The 2026-07-19 docs audit found the core docs still describing a single 3-zome DNA with localStorage groups; several audit items had already been fixed by #111, so each item was re-verified against current dev before editing.

Changes

P1 (actively misleading):

P2 (incomplete):

  • DOCUMENTATION_INDEX.md: zome_lobby correctly described as the group registry; paths fixed for files moved/renamed by feat(ui): DNA-backed groups, multi-agent web harness, and NDO layer-0 UI #111 (lobby-architecture.md, lobby-dna.md, ndo-versioning.md); status labels updated
  • documentation/README.md: links to zomes/lobby_zome.md and zomes/group_zome.md
  • TEST_COMMANDS.md, Testing_Infrastructure.md: stale announce_ndo test references replaced with real lobby suite names

Not touched (already accurate): zomes/lobby_zome.md and zomes/group_zome.md (the latter gains NdoAnchor in #115, not here). ui_design.md and IMPLEMENTATION_STATUS.md audit items were already fixed by #111.

Sequencing

Merge after #115 so the ndo-role references (ADR-013, README status, index) document merged reality. No code changes.

Closes #113

- ARCHITECTURE_COMPONENTS.md: multi-DNA executive summary and topology diagram
  (Lobby, Group, NDO, hREA roles alongside the 3-zome core); PPR category count
  corrected to 16; ADR-001 status note; new ADR-013 recording the DNA split
- README.md: multi-DNA overview and architecture section, development status
  records #103/#107/#111 and the in-progress #112, per-DNA Sweettest suites
- DOCUMENTATION_INDEX.md: zome_lobby described as the group registry (NDO
  announcements were removed in #107); paths fixed for files moved by #111
  (lobby-architecture.md, lobby-dna.md, ndo-versioning.md); status labels updated
- lobby-architecture.md: supersession banner — shipped registry model is
  inverted (Lobby registers groups); NdoAnchor resurrects the NdoDescriptor idea
  at group level, keeping the decision trail honest
- lobby-dna.md: implementation notes and REQ-LOBBY-04..06 statuses reflect the
  #107 removal of NdoAnnouncement; section 10 state tables rewritten to current
  reality (#103/#107/#111 shipped, #112/#110 in progress)
- ui_architecture.md: group-scoped Lobby description; conductor diagram lists
  all five DNA roles
- documentation/README.md: lobby and group zome docs linked
- TEST_COMMANDS.md, Testing_Infrastructure.md: stale announce_ndo test
  references replaced with real lobby test names
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docs: retrofit architecture docs to multi-DNA reality

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