chore(deps): bump tifffile from 2024.9.20 to 2026.3.3

[dependabot]

Bumps tifffile from 2024.9.20 to 2026.3.3.

Release notes

Sourced from tifffile's releases.

v2026.3.3

Read and write TIFF files

Tifffile is a comprehensive Python library to

1. store NumPy arrays in TIFF (Tagged Image File Format) files, and
2. read image and metadata from TIFF-like files used in bioimaging.

Image and metadata can be read from TIFF, BigTIFF, OME-TIFF, GeoTIFF, Adobe DNG, ZIF (Zoomable Image File Format), MetaMorph STK, Zeiss LSM, ImageJ hyperstack, Micro-Manager MMStack and NDTiff, SGI, NIHImage, Olympus FluoView and SIS, ScanImage, Molecular Dynamics GEL, Aperio SVS, Leica SCN, Roche BIF, PerkinElmer QPTIFF (QPI, PKI), Hamamatsu NDPI, Argos AVS, Philips DP, and ThermoFisher EER formatted files.

Image data can be read as NumPy arrays or Zarr arrays/groups from strips, tiles, pages (IFDs), SubIFDs, higher order series, and pyramidal levels.

Image data can be written to TIFF, BigTIFF, OME-TIFF, and ImageJ hyperstack compatible files in multi-page, volumetric, pyramidal, memory-mappable, tiled, predicted, or compressed form.

Many compression and predictor schemes are supported via the imagecodecs library, including LZW, PackBits, Deflate, CCITT, PIXTIFF, LZMA, LERC, Zstd, JPEG (8 and 12-bit, lossless), JPEG 2000, JPEG XR, JPEG XL, WebP, PNG, EER, Jetraw, 24-bit floating-point, and horizontal differencing.

Tifffile can also be used to inspect TIFF structures, read image data from multi-dimensional file sequences, write fsspec ReferenceFileSystem for TIFF files and image file sequences, patch TIFF tag values, and parse many proprietary metadata formats.

Changes

• Do not convert TVIPS pixel sizes to m (#319).
• Support writing packed integers with imagecodecs > 2026.1.14.
• Support reading ccitt compressed images with imagecodecs > 2026.1.14.

v2026.2.24

Read and write TIFF files

Tifffile is a comprehensive Python library to

1. store NumPy arrays in TIFF (Tagged Image File Format) files, and
2. read image and metadata from TIFF-like files used in bioimaging.

Image and metadata can be read from TIFF, BigTIFF, OME-TIFF, GeoTIFF, Adobe DNG, ZIF (Zoomable Image File Format), MetaMorph STK, Zeiss LSM, ImageJ hyperstack, Micro-Manager MMStack and NDTiff, SGI, NIHImage, Olympus FluoView and SIS, ScanImage, Molecular Dynamics GEL, Aperio SVS, Leica SCN, Roche BIF, PerkinElmer QPTIFF (QPI, PKI), Hamamatsu NDPI, Argos AVS, Philips DP, and ThermoFisher EER formatted files.

Image data can be read as NumPy arrays or Zarr arrays/groups from strips, tiles, pages (IFDs), SubIFDs, higher order series, and pyramidal levels.

Image data can be written to TIFF, BigTIFF, OME-TIFF, and ImageJ hyperstack compatible files in multi-page, volumetric, pyramidal, memory-mappable, tiled, predicted, or compressed form.

Many compression and predictor schemes are supported via the imagecodecs library, including LZW, PackBits, Deflate, PIXTIFF, LZMA, LERC, Zstd, JPEG (8 and 12-bit, lossless), JPEG 2000, JPEG XR, JPEG XL, WebP, PNG, EER, Jetraw, 24-bit floating-point, and horizontal differencing.

Tifffile can also be used to inspect TIFF structures, read image data from multi-dimensional file sequences, write fsspec ReferenceFileSystem for TIFF files and image file sequences, patch TIFF tag values, and parse many proprietary metadata formats.

Changes

• Remove deprecated TiffPages.pages and FileSequence.files (breaking).
• Remove stripnull, stripascii, and bytestr functions (breaking).
• Rewrite command line interfaces (breaking).
• Support Experimenter and Project elements in OmeXml.
• Refactor TiffPages.
• Fix code review issues.

... (truncated)

Changelog

Sourced from tifffile's changelog.

2026.3.3

• Do not convert TVIPS pixel sizes to m (#319).
• Support writing packed integers with imagecodecs > 2026.1.14.
• Support reading ccitt compressed images with imagecodecs > 2026.1.14.

2026.2.24

• Remove deprecated TiffPages.pages and FileSequence.files (breaking).
• Remove stripnull, stripascii, and bytestr functions (breaking).
• Rewrite command line interfaces (breaking).
• Support Experimenter and Project elements in OmeXml.
• Refactor TiffPages.
• Fix code review issues.

2026.2.20

• Fix rounding of high resolutions (#318).
• Fix code review issues.

2026.2.16

• Optimize reading multi-file pyramidal OME TIFF files.

2026.2.15

• Support reading multi-file pyramidal OME TIFF files (image.sc/t/119259).

2026.1.28

• Deprecate colormaped parameter in imagej_description (use colormapped).
• Fix code review issues.

2026.1.14

• Improve code quality.

2025.12.20

• Do not initialize output arrays.

2025.12.12

• Improve code quality.

2025.10.16

• Add option to decode EER super-resolution sub-pixels (breaking, #313).
• Parse EER metadata to dict (breaking).

... (truncated)

Commits

• 503cb4e Release v2026.3.3
• 8c91499 Update CHANGES.rst
• edede60 Update tifffile/tifffile.py
• 7d9eaed Update tests/test_tifffile.py
• 2798a13 Release v2026.2.24
• 6c284bb Update CHANGES.rst
• 6ae6fc8 Update tests/test_tifffile.py
• 9cc4a7b Update tifffile/tifffile.py
• fe418ab Update tifffile/_imagecodecs.py
• f48a45f Update examples/issue125.py
• Additional commits viewable in compare view

[github-actions]

Major version bump, so this one waits for a maintainer.

[github-actions]

Major version bump, so this one waits for a maintainer.

[github-actions]

Major version bump, so this one waits for a maintainer.