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Code update procedures
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walkerhound edited this page
Sep 14, 2012
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This page describes steps required to update code for a new release
Go back to Release Procedures
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Code Documentation
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Code update procedures
This page describes steps required to update code for a new release
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Compile
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Configure files
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Database Administration
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Database update procedures
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David
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Detailed transcription information
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Download Sequence Files from UCSC
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Encode transcriptome data
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eQTLs
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External Utilities
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Genome Build Updates
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Idecoder update
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Install ensembl perl api
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Installation
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Limit resources and create profile and kill processes
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Perl module updates
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R module updates
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Release Procedures
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Release testing
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Setup DB Pool Connection User
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Startup after a complete shutdown
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System administration
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Testingstuff
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Tnsnames.ora file
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Tomcat administration
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Update EXON_IDENTIFIERS
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Update EXPRESSION_QTLS
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Update GENE_SYMBOLS
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Useful grep tricks
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Useful sed tricks
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Useful unix monitoring commands
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