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- #163 · cflerin opened
on May 1, 2020 2 - #172 · singcell opened
on May 18, 2020 3 - #169 · diegoalexespi opened
on May 17, 2020 7
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[BUG] pyscenic --help crashes on NumPy >= 1.24: np.object was removed
bugSomething isn't workingSomething isn't workingStatus: Open.#639 In aertslab/pySCENIC;some TF in TF gene list is not belong to TF,it's transcrip inhibitors.
bugSomething isn't workingSomething isn't workingStatus: Open.#638 In aertslab/pySCENIC;[BUG] indexing bug in transform.py causes errors in leading edge computation
bugSomething isn't workingSomething isn't workingStatus: Open.#635 In aertslab/pySCENIC;ValueError: CisTargetDatabase object is in an inconsistent state: "region_or_gene_ids_loaded" attribute is None, but "df_cached" is not.
bugSomething isn't workingSomething isn't workingStatus: Open.#634 In aertslab/pySCENIC;[BUG] aucell pyscenic.cli.pyscenic - ERROR - Expression matrix should be provided in the loom file format.
bugSomething isn't workingSomething isn't workingStatus: Open.#632 In aertslab/pySCENIC;- Status: Open.#631 In aertslab/pySCENIC;
[BUG]
src/resources/contents already provided byctxcorebugSomething isn't workingSomething isn't workingStatus: Open.#630 In aertslab/pySCENIC;Low regulon recovery in pySCENIC ctx for two butterfly scRNA-seq datasets
bugSomething isn't workingSomething isn't workingStatus: Open.#628 In aertslab/pySCENIC;- Status: Open.#627 In aertslab/pySCENIC;
[BUG]Running grn but discontinued without any errors
bugSomething isn't workingSomething isn't workingStatus: Open.#626 In aertslab/pySCENIC;Low expression and high RSS of regulons
questionFurther information is requestedFurther information is requestedStatus: Open.#624 In aertslab/pySCENIC;- Status: Open.#623 In aertslab/pySCENIC;