Issues

• Add visualization CLI

  computationalpathologygroup/segmenteer#65 · Filter by author siemdejong opened on Oct 21, 2026

• Add benchmark CLI

  computationalpathologygroup/segmenteer#63 · Filter by author siemdejong opened on Oct 21, 2026

• Review all the methods implementations again

  computationalpathologygroup/segmenteer#62 · Filter by author polejowska opened on Oct 21, 2026
  

• Histomics dependency issue.

  computationalpathologygroup/segmenteer#61 · Filter by author siemdejong opened on Oct 14, 2026

• SlideSegmenter goes out of memory on larger slides

  computationalpathologygroup/segmenteer#57 · Filter by author siemdejong opened on Sep 7, 2026
  2

  

• add licensing information

  computationalpathologygroup/segmenteer#54 · Filter by author siemdejong opened on Sep 2, 2026

• [add method] TIA toolbox

  computationalpathologygroup/segmenteer#53 · Filter by author siemdejong opened on Sep 2, 2026

• Normalization CPG possibly incorrect

  computationalpathologygroup/segmenteer#50 · Filter by author siemdejong opened on May 27, 2026
  

• CPG speedup

  computationalpathologygroup/segmenteer#49 · Filter by author siemdejong opened on May 27, 2026
  

• Make command line interface

  computationalpathologygroup/segmenteer#46 · Filter by author siemdejong opened on Apr 30, 2026
  4

  

• Decouple methods-dependencies

  computationalpathologygroup/segmenteer#44 · Filter by author polejowska opened on Apr 16, 2026

• Document and verify the metrics

  computationalpathologygroup/segmenteer#41 · Filter by author polejowska opened on Apr 1, 2026

• Check if default spacings are the recommended spacings by the paper

  question
  computationalpathologygroup/segmenteer#35 · Filter by author siemdejong opened on Mar 19, 2026
  1

  

• Tissue segmentation algorithm list

  new-algorithm
  computationalpathologygroup/segmenteer#31 · Filter by author siemdejong opened on Feb 4, 2026
  1

• Consistency/reproducability measurements

  computationalpathologygroup/segmenteer#11 · Filter by author polejowska opened on Nov 13, 2025
  2

• Data validation layer implementation

  computationalpathologygroup/segmenteer#10 · Filter by author polejowska opened on Nov 13, 2025
  1