Name		Name	Last commit message	Last commit date
gassembly		gassembly
getStructures4sequences		getStructures4sequences
mapping		mapping
.gitattributes		.gitattributes
Archive.zip		Archive.zip
README.md		README.md
XLdock_local.pl		XLdock_local.pl
add3didUpdate2dima.pl		add3didUpdate2dima.pl
addAnnotation.pl		addAnnotation.pl
addBindingSiteInfo2gffFile.pl		addBindingSiteInfo2gffFile.pl
addBindingSiteInfo2gffFileTmp.pl		addBindingSiteInfo2gffFileTmp.pl
addBindingSiteInfo2gtfFile.pl		addBindingSiteInfo2gtfFile.pl
addBindingSites2maps.pl		addBindingSites2maps.pl
addCNAdata2ssm.pl		addCNAdata2ssm.pl
addCancerGeneNeighbourhood.pl		addCancerGeneNeighbourhood.pl
addCathId2datasetCandidates.pl		addCathId2datasetCandidates.pl
addGeneNameAndDensity4cosmicInteractors.pl		addGeneNameAndDensity4cosmicInteractors.pl
addInteractionProb.pl		addInteractionProb.pl
addIntronToEnsemblExons.pl		addIntronToEnsemblExons.pl
addMutualInteractionCount.pl		addMutualInteractionCount.pl
addPDBIdToA3m.pl		addPDBIdToA3m.pl
addPfam2bsAnno.pl		addPfam2bsAnno.pl
addPfam2stringInteraction.pl		addPfam2stringInteraction.pl
addPfam2stringInteractionFromBlast.pl		addPfam2stringInteractionFromBlast.pl
addTERflag.pl		addTERflag.pl
addUniprotNo2PDBno.pl		addUniprotNo2PDBno.pl
alignPos.pl		alignPos.pl
alignSeqs.pl		alignSeqs.pl
allVsAll.pl		allVsAll.pl
allVsAllElectroFlip.pl		allVsAllElectroFlip.pl
aln2grishin.pl		aln2grishin.pl
amino_acids.py		amino_acids.py
amino_acids.pyc		amino_acids.pyc
amrHisto.pl		amrHisto.pl
assessProbis.pl		assessProbis.pl
assessProbis2.pl		assessProbis2.pl
assessString3dCalibrationKeggTest.pl		assessString3dCalibrationKeggTest.pl
assignTissueSpecificity2genes.pl		assignTissueSpecificity2genes.pl
atomPotDiff.pl		atomPotDiff.pl
avg.pl		avg.pl
avgAtomPot2.pl		avgAtomPot2.pl
avgCoeff.pl		avgCoeff.pl
avgCommandline.pl		avgCommandline.pl
avgCommandline4dataset.pl		avgCommandline4dataset.pl
bindingSiteMap.pl		bindingSiteMap.pl
bitScore.pl		bitScore.pl
blastSumMin.pl		blastSumMin.pl
blast_parser.pl		blast_parser.pl
calibrate_scores.pl		calibrate_scores.pl
calibrate_scores_AK.pl		calibrate_scores_AK.pl
canonicalDTU.pl		canonicalDTU.pl
canonicalDTUmean.pl		canonicalDTUmean.pl
canonicalIsoformExpressionInCancer.pl		canonicalIsoformExpressionInCancer.pl
center.pl		center.pl
changeAltLoc.pl		changeAltLoc.pl
changeChainId.pl		changeChainId.pl
changeChainId.txt		changeChainId.txt
changeInsertionCode.pl		changeInsertionCode.pl
changeResidueNumber.pl		changeResidueNumber.pl
changeResidueNumber.txt		changeResidueNumber.txt
chip.pl		chip.pl
cleanAltLoc.pl		cleanAltLoc.pl
cleanString3d.pl		cleanString3d.pl
cleanString3dFromBlast.pl		cleanString3dFromBlast.pl
clusterPPInetwork.pl		clusterPPInetwork.pl
coMutatedGenes.pl		coMutatedGenes.pl
col2row.pl		col2row.pl
combineNormScores.pl		combineNormScores.pl
combineScores.pl		combineScores.pl
combineWeightedScores.pl		combineWeightedScores.pl
comparativeModelling.pl		comparativeModelling.pl
complementarity.pl		complementarity.pl
consurf2uniprot.pl		consurf2uniprot.pl
convert2allVsAll.pl		convert2allVsAll.pl
convert2pcawgGenesetFormat.pl		convert2pcawgGenesetFormat.pl
convert2pcawgGenesetFormatRandomized.pl		convert2pcawgGenesetFormatRandomized.pl
convert2pcawgGenesetFormatSubnetwork.pl		convert2pcawgGenesetFormatSubnetwork.pl
copyCleftCoeffFiles.pl		copyCleftCoeffFiles.pl
copyCleftSurfaceFiles.pl		copyCleftSurfaceFiles.pl
correctBsId.pl		correctBsId.pl
count.pl		count.pl
countHydrogenBondsBetweenDifferentChains.pl		countHydrogenBondsBetweenDifferentChains.pl
countResiduesInPdb.pl		countResiduesInPdb.pl
countStats.pl		countStats.pl
countStatsPerGene.pl		countStatsPerGene.pl
cov.pl		cov.pl
covidChip.pl		covidChip.pl
cpConformDecoys.pl		cpConformDecoys.pl
createAucRscripts.pl		createAucRscripts.pl
createBoxplotRscripts.pl		createBoxplotRscripts.pl
createCircosScript.pl		createCircosScript.pl
createCoeffCompareFlip.pl		createCoeffCompareFlip.pl
createCoeffCompareFlipLorna.pl		createCoeffCompareFlipLorna.pl
createCommonString3dBlastDataset.pl		createCommonString3dBlastDataset.pl
createDatasetRunScript4multimericComplexes.pl		createDatasetRunScript4multimericComplexes.pl
createInteractions.pl		createInteractions.pl
createInteractions4ensp.pl		createInteractions4ensp.pl
createKinaseSubstrate.pl		createKinaseSubstrate.pl
createLoopFile.pl		createLoopFile.pl
createRGgroup.pl		createRGgroup.pl

Repository files navigation

BioinfoScripts

Perl script tool box for various bioinformatics problems

About

Perl script tool box for various bioinformatics problems

Custom properties

0 stars

1 watching

Report repository

Releases

Packages

Contributors

Languages