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Backport PR #4276 on branch 1.12.x (ci: run prek in GH actions) - #4283

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flying-sheep merged 4 commits into
1.12.xfrom
auto-backport-of-pr-4276-on-1.12.x
Aug 6, 2026
Merged

Backport PR #4276 on branch 1.12.x (ci: run prek in GH actions)#4283
flying-sheep merged 4 commits into
1.12.xfrom
auto-backport-of-pr-4276-on-1.12.x

fix broken ref

2e3ffdc
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Codecov Report

✅ All modified and coverable lines are covered by tests.
⚠️ Please upload report for BASE (1.12.x@dbddb89). Learn more about missing BASE report.
✅ All tests successful. No failed tests found.

Additional details and impacted files
@@            Coverage Diff            @@
##             1.12.x    #4283   +/-   ##
=========================================
  Coverage          ?   78.59%           
=========================================
  Files             ?      121           
  Lines             ?    12744           
  Branches          ?        0           
=========================================
  Hits              ?    10016           
  Misses            ?     2728           
  Partials          ?        0           
Files with missing lines Coverage Δ
src/scanpy/_utils/__init__.py 77.72% <ø> (ø)
src/scanpy/experimental/pp/_normalization.py 94.04% <ø> (ø)
src/scanpy/plotting/_baseplot_class.py 88.61% <100.00%> (ø)
src/scanpy/plotting/_dotplot.py 94.94% <ø> (ø)
src/scanpy/plotting/_matrixplot.py 96.62% <ø> (ø)
src/scanpy/plotting/_stacked_violin.py 86.06% <ø> (ø)
src/scanpy/plotting/_tools/scatterplots.py 83.87% <ø> (ø)
src/scanpy/preprocessing/_pca/__init__.py 90.65% <ø> (ø)
src/scanpy/preprocessing/_simple.py 90.96% <ø> (ø)
src/scanpy/readwrite.py 80.76% <ø> (ø)