Differential analysis tool for coding-free researchers – instant statistical results and charts, ready for your lab meeting. Just unzip and run! No-coding!
OLAPH: Improving Factuality in Biomedical Long-form Question Answering
MCP SDK v2 server for PubMed and multi-source biomedical research, with resilient search, full text, citations, and tenant-safe deployment.
Connecting AI to biomedical data
Chinese Mammography Database (CMMD dataset) Deep Learning Classification Pipeline
Website for the JuliaHealth organization (powered by Franklin.jl).
Claude Code skill for verifying OpenEvidence biomedical citations against PubMed with parallel accuracy scoring and audit reports
Accelerate common Petri dish assays with AI.
curated links and customized materials to support biomedical researchers in implementing open science approaches
Compliance-first coding harness for working with sensitive biomedical research data.
A resource for biomedical students and researchers. Includes proteomics software tools like FragPipe, MaxQuant, PDV, SearchGUI, ThermoRawFileParser, and PeptideShaker. Offers a user-friendly interface, automated identification and quantification, comprehensive data analysis, and lightweight clone feature for optimized storage.
Biomedical knowledge graph builder.
Repository containing trained YOLOv5 object detection models used within OnePetri for Petri dish and plaque detection.
Collaboratively written manuscript discussing Ten Simple Rules for Enabling Open Science in Biomedical Research
My assignments and projects concerned with Biomedical Engineering
B.Sc. Thesis Deep Learning & NLP research on Medical Image Captioning
suggestions to practice machine learning for biomedical applications
This repository provides a practical, data-centric AI/ML module for biomedical researchers. It covers R programming, data preparation, model building, and AI/ML applications using AWS SageMaker and Jupyter notebooks.
Repository of excel templates of routine tasks performed in the laboratory
PubMed literature assistant with journal metrics, smart filtering and local Markdown notes
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