Protein language model trained on coding DNA
Python Implementation of Codon Adaption Index
Python package of codon usage bias analysis tools
🌲 a flexible gene expression simulator with codon-specific translation rates
Simple Python program to perform codon optimization or heterology calculations.
Program in R for calculating RSCU.
Codon-based alignment for CDS sequences
CoreTracker, a codon reassignment tracker
MATLAB package for codon usage bias and NGS analysis
Memorize Nirenberg codon mRNA table components with exciting game! 생명과학 2 수능 선택자들을 위한 mRnA 코돈 암기 게임 애플리케이션.
システム上で使用する暗号化システムに、mRNAコドンの仕組みを応用する研究です
Deep Learning LSTM Model for Gene Classification
CodonScope is an interactive web tool for visualizing and analyzing DNA sequences, translating them into codons, amino acids, and mutations, with a user-friendly interface for genetic sequence analysis.
Extracts all of the possible genes from a string of DNA
An implementation of the Min-Max algorithm to determine the rareness of the codons within a base pair sequence.
First public release of the QSOL Unified Field Framework. Includes sexagesimal, trinary, and codon mapping modules, microtonal tuning utilities, and complete Zenodo/QAInN integration. DOI: 10.5281/zenodo.17520187 License: CC BY 4.0 Motto: Small is Beautiful. Fast is Holy. Transparent by Design
Techniques to analyze biological data generated by genome sequencing, proteomics, cell-wide measurements of gene expression changes. Algorithms for single/multiple sequence alignments/assembly. Search algorithms for sequence databases, phylogenetic tree construction algorithms. Algorithms for gene/promoter and protein structure prediction.
A pipeline to do compute and inference using ML tools on codons and DNA
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