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urva734/README.md

Hi there, I'm Urva 👋

Typing SVG

Building tools at the intersection of Biology, Medicine & Code.

🔬 What I Build:

  • Structural Bioinformatics - PDB Geometry Validators (Bond Length, Angle, Ramachandran)
  • Genomics Tools - Ribosome profiling simulations in Java
  • Medical Systems - Pharmacy & Hospital Management Systems
  • Web & Mobile Apps - Responsive websites & Flutter Apps

💻 Tech Stack: Python Bioinformatics Matplotlib PDB Java TypeScript Flutter Dart JavaScript Git

🎓 Currently: BS Bioinformatics Undergraduate

💡 Goal: Aspiring Computational Biologist & Software Developer | Open to roles in Bioinformatics, Genomics Software & Web Development.

🧬 : PDB Geometry Series - Python

Building from scratch, no BioPython dependency - Tested on 1AKI - Lysozyme (129aa):

Project Validates Core Concept
01 - Fetcher RCSB PDB download & parse ATOM records
02 - Peptide Bond C-N bond ~1.33Å Peptide linkage
03 - Bond Angle N-CA-C ~111° Tetrahedral geometry
04 - Ramachandran Phi/Psi angles Backbone dihedral

All tools use matplotlib for validation plots - pure Python math.

🔥 Featured Projects

🧬 PDB Geometry Toolkit (Python)

Pure-Python tools for PDB validation - fetcher, bond length, bond angle & Ramachandran plots.

PDB-01 PDB-02 PDB-03 PDB-04


🍔 OpenCore Foodie Flame - Flutter Recipe App

A smart IoT & web-enabled recipe app with search, categories, favorites & real-time tracking.

SOURCE CODE


🏥 Medical Pharmacy Management System

A complete hospital system to manage inventory, sales, and patients.

SOURCE CODE VIEW ALL

📊 GitHub Stats


" Code is like humor. When you have to explain it, it's bad. "

- Cory House


Thanks for visiting! Let's build something amazing for Biology + Code 🧬💻

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  1. pdb-geometry-04-ramachandran pdb-geometry-04-ramachandran Public

    Pure-Python Ramachandran plot tool - calculates Phi/Psi dihedral angles from PDB to validate protein backbone geometry (Lysozyme 1AKI)

    Python

  2. pdb-geometry-01-fetcher- pdb-geometry-01-fetcher- Public

    Python tool that downloads PDB structures directly from RCSB - no BioPDB dependency - PDB Geometry 01

    Python