fix(portable): stop shipping the upstream agents/ folder

tools/portable/prepare.py

@@ -120,7 +120,9 @@ def render_package(layout: PackageLayout, upstream_commit: str) -> ArtifactTree:
             target = 'skills/poteto-mode/references/portable-agents/' + Path(name).name
             if target in overlay:
                 raise ValueError(f'Portable asset collides with generated agent: {target}')
-            overlay[target] = artifact
+            overlay[target] = tree.pop(name)
+        elif re.fullmatch(r'docs/.+\.md', name):
+            tree[name] = Artifact(artifact.data.replace(b'](../../agents/', b'](../../skills/poteto-mode/references/portable-agents/'), artifact.mode)
     dependency = layout.upstream.parent / 'cursor-team-kit'
     for name in ('skills/deslop/SKILL.md', 'LICENSE'):
         path = dependency / name
@@ -271,7 +273,7 @@ def render_thermos(layout: PackageLayout, upstream_commit: str) -> ArtifactTree:
         target = f'skills/thermos/references/agents/{role}-subagent.md'
         if target in overlay:
             raise ValueError(f'Portable asset collides with agent reference: {target}')
-        overlay[target] = tree[name]
+        overlay[target] = tree.pop(name)
     return add_overlay(tree, overlay, upstream_commit)
 
 

tools/portable/test_thermos.py

@@ -68,6 +68,9 @@ def test_all_source_bytes_modes_and_inputs_are_preserved(self):
         self.assertEqual({p.parent.name for p in self.layout.published.glob('skills/*/SKILL.md')}, SKILLS)
         for name, original in source.items():
             with self.subTest(file=name):
+                if name.startswith('agents/'):
+                    self.assertNotIn(name, generated)
+                    continue
                 actual = generated[name]
                 if re.fullmatch(r'skills/[^/]+/SKILL.md', name):
                     self.assertEqual(actual.data.count(THERMOS_NOTICE.encode()), 1)