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Optional whitelist Severus calling (--severus_whitelist), patched Severus 1.7 - #215

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AmberVerhasselt merged 6 commits into

IntGenomicsLab:devfrom

AmberVerhasselt:feat/severus-whitelist

Oct 7, 2026

Commits on Oct 2, 2026
- Add optional whitelist Severus calling (--severus_whitelist)
  
  AmberVerhasselt
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  claude
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  1511db3
- Address review on #215: module stub test, meta.yml outputs, CHANGELOG, help_text
  
  AmberVerhasselt
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  393e7ce
- Fold SEVERUS_WHITELIST into SEVERUS (optional whitelist input)
  
  AmberVerhasselt
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  claude
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  38e5191
- Address review on #215: meta.yml inputs, module tests, small whitelist test
  
  AmberVerhasselt
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  claude
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  9016b74
- Move SEVERUS whitelist test to tests/modules to satisfy nf-core lint
  
  AmberVerhasselt
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  ce36b24
Commits on Oct 7, 2026
- Merge upstream/dev into feat/severus-whitelist
  
  AmberVerhasselt
  and
  claude
  committed
  90b4087