-
Notifications
You must be signed in to change notification settings - Fork 7
All issues
Issue creation is restricted in this repository
Issues
is:issue state:open
is:issue state:open
Search results
Audit: does DashMap/HashMap iteration order in the splice-junction path reach any output?
bugSomething isn't workingSomething isn't workingStatus: Open.#210 In scverse/rustar-aligner;docs: add DEPENDENCIES.md recording accepted and declined crates
documentationImprovements or additions to documentationImprovements or additions to documentationStatus: Open.#209 In scverse/rustar-aligner;Dependency discussion: interval-overlap crates (superintervals / coitrees / rust-lapper)
dependenciesPull requests/issues that update a dependency filePull requests/issues that update a dependency fileStatus: Open.#208 In scverse/rustar-aligner;deps: noodles 0.113 -> 0.115 and noodles-bgzf 0.49 -> 0.51 (local thread pools, with_worker_count)
dependenciesPull requests/issues that update a dependency filePull requests/issues that update a dependency fileStatus: Open.#207 In scverse/rustar-aligner;--limitBAMsortRAM aborts instead of spilling: evaluate an external sort for coordinate-sorted BAM
enhancementNew feature or requestNew feature or requestStatus: Open.#206 In scverse/rustar-aligner;Dependency discussion: portable SIMD crate (wide/pulp) vs the hand-rolled intrinsics in simd_scan.rs
dependenciesPull requests/issues that update a dependency filePull requests/issues that update a dependency fileStatus: Open.#205 In scverse/rustar-aligner;dev-deps: add a benchmark harness (divan or criterion) — there is no benches/ today
dependenciesPull requests/issues that update a dependency filePull requests/issues that update a dependency fileStatus: Open.#204 In scverse/rustar-aligner;Dependency discussion: the rust-seq crates (packed-seq, simd-minimizers, seq-hash)
dependenciesPull requests/issues that update a dependency filePull requests/issues that update a dependency fileStatus: Open.#203 In scverse/rustar-aligner;Dependency discussion: sufr/libsufr for suffix-array construction (vs the caps-sa incumbent)
dependenciesPull requests/issues that update a dependency filePull requests/issues that update a dependency fileStatus: Open.#202 In scverse/rustar-aligner;Dependency survey (Aug 2026): umbrella for the crate evaluations
dependenciesPull requests/issues that update a dependency filePull requests/issues that update a dependency fileStatus: Open.#201 In scverse/rustar-aligner;CellRanger4 + clip5pNbases/clip3pNbases misplaces reads by clip5pNbases
bugSomething isn't workingSomething isn't workingStatus: Open.#199 In scverse/rustar-aligner;New Dependency: hyalite for CR4
dependenciesPull requests/issues that update a dependency filePull requests/issues that update a dependency fileStatus: Open.#197 In scverse/rustar-aligner;