feat: STARlong binary + long-read window-coverage filter - #116

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Commits on Jul 29, 2026

feat: STARlong binary + long-read window-coverage filter

BenjaminDEMAILLE
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claude
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16b7df3
fix(starlong): adopt the extend_to_end parameter added by #145

BenjaminDEMAILLE
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claude
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e764351
fix(starlong): do not discard a window when a traceback edge fails
BenjaminDEMAILLE
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e2fa5a2
fix(starlong): STARlong does not apply the per-motif stitch mismatch cap
BenjaminDEMAILLE
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f6f03d8
docs: record the STARlong faithfulness fixes and the reads they recover
BenjaminDEMAILLE
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bbda131