Babelscape / cner Star 13 Code Issues Pull requests CNER: Concept and Named Entity Recognition nlp machine-learning information-extraction named-entity-recognition concept-recognition token-classification Updated Jul 15, 2024 Jupyter Notebook
monarch-initiative / ontorunner Star 11 Code Issues Pull requests nlp monarchinitiative obofoundry concept-recognition Updated Feb 23, 2023 Jupyter Notebook
vemonet / concept-resolver Star 3 Code Issues Pull requests 🔎 A name resolution service for biomedical concepts, using vector databases and similarity search similarity-search vector-database concept-recognition biomedical-concept-embeddings Updated Jan 24, 2024 Python
synixbio / mmlite Star 0 Code Issues Pull requests Pure-Python port of NLM MetaMapLite: near-real-time UMLS concept recognition as a library, CLI and REST API — no JVM python nlp healthcare named-entity-recognition ner biomedical umls medical-informatics metamap clinical-nlp concept-recognition metamaplite Updated Sep 25, 2026 Python